Lineage for d2j09a1 (2j09 A:172-420)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.99: Cryptochrome/photolyase FAD-binding domain [48172] (1 superfamily)
    multihelical; consists of two all-alpha subdomains
  4. Superfamily a.99.1: Cryptochrome/photolyase FAD-binding domain [48173] (2 families) (S)
    automatically mapped to Pfam PF03441
  5. Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain [48174] (3 proteins)
  6. Protein C-terminal domain of DNA photolyase [48175] (3 species)
    N-terminal domain is alpha/beta and binds a light-harvesting cofactor
  7. Species Thermus thermophilus [TaxId:274] [69083] (5 PDB entries)
  8. Domain d2j09a1: 2j09 A:172-420 [137895]
    Other proteins in same PDB: d2j09a2
    automated match to d1iqra1
    complexed with cl, fad, fmn, po4

Details for d2j09a1

PDB Entry: 2j09 (more details), 2 Å

PDB Description: thermus dna photolyase with fmn antenna chromophore
PDB Compounds: (A:) deoxyribodipyrimidine photo-lyase

SCOPe Domain Sequences for d2j09a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2j09a1 a.99.1.1 (A:172-420) C-terminal domain of DNA photolyase {Thermus thermophilus [TaxId: 274]}
lplpepgeeaalaglrafleaklpryaeerdrldgeggsrlspyfalgvlsprlaaweae
rrggegarkwvaellwrdfsyhllyhfpwmaerpldprfqafpwqedealfqawyegktg
vplvdaamrelhatgflsnrarmnaaqfavkhlllpwkrceeafrhllldgdravnlqgw
qwagglgvdaapyfrvfnpvlqgerhdpegrwlkrwapeypsyapkdpvvdleearrryl
rlardlarg

SCOPe Domain Coordinates for d2j09a1 are not available.

Timeline for d2j09a1:

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Domains from same chain:
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d2j09a2