SCOPe 2.08: Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain

Lineage for Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.99: Cryptochrome/photolyase FAD-binding domain [48172] (1 superfamily)
   multihelical; consists of two all-alpha subdomains

4. Superfamily a.99.1: Cryptochrome/photolyase FAD-binding domain [48173] (2 families)
   automatically mapped to Pfam PF03441

5. Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain [48174] (3 proteins)

Proteins:

1. C-terminal domain of DNA photolyase [48175] (3 species)
   N-terminal domain is alpha/beta and binds a light-harvesting cofactor

   1. Species Escherichia coli [TaxId:562] [48176] (1 PDB entry)

   2. Species Synechococcus elongatus [TaxId:32046] [48177] (7 PDB entries)
      Uniprot P05327 1-474

   3. Species Thermus thermophilus [TaxId:274] [69083] (5 PDB entries)

2. Cryptochrome C-terminal domain [81841] (3 species)

   1. Species Mouse (Mus musculus) [TaxId:10090] [226830] (12 PDB entries)

   2. Species Synechocystis sp. PCC 6803 [TaxId:1148] [81842] (1 PDB entry)

   3. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [109947] (2 PDB entries)
      Uniprot Q43125 13-497

3. automated matches [228408] (1 species)
   not a true protein

   • Species Mouse (Mus musculus) [TaxId:10090] [228409] (8 PDB entries)

More info for Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain

Timeline for Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain:

• Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain first appeared (with stable ids) in SCOP 1.55, called Family a.99.1.1: FAD-binding (C-terminal) domain of DNA photolyase
  
• Family a.99.1.1: Cryptochrome/photolyase FAD-binding domain appears in SCOPe 2.07