Lineage for d2hbma1 (2hbm A:421-516)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1999332Superfamily a.60.8: HRDC-like [47819] (5 families) (S)
  5. 1999367Family a.60.8.4: EXOSC10 HRDC domain-like [140646] (2 protein domains)
  6. 1999368Protein Exosome complex exonuclease RRP6 domain [140647] (1 species)
  7. 1999369Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [140648] (4 PDB entries)
    Uniprot Q12149 421-516
  8. 1999373Domain d2hbma1: 2hbm A:421-516 [136317]
    Other proteins in same PDB: d2hbma2, d2hbma3
    automated match to d2hbja1
    protein/RNA complex; complexed with mn, u, zn

Details for d2hbma1

PDB Entry: 2hbm (more details), 2.7 Å

PDB Description: Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn, Zn, and UMP
PDB Compounds: (A:) Exosome complex exonuclease RRP6

SCOPe Domain Sequences for d2hbma1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hbma1 a.60.8.4 (A:421-516) Exosome complex exonuclease RRP6 domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

SCOPe Domain Coordinates for d2hbma1:

Click to download the PDB-style file with coordinates for d2hbma1.
(The format of our PDB-style files is described here.)

Timeline for d2hbma1: