Lineage for d1yhcb1 (1yhc B:2-127)

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2157367Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
    core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
  4. 2157368Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families) (S)
  5. 2157878Family d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (2 protein domains)
    duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site
  6. 2157879Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89828] (1 species)
  7. 2157880Species Aquifex aeolicus [TaxId:63363] [89829] (16 PDB entries)
    Uniprot O67648 3-270
  8. 2157899Domain d1yhcb1: 1yhc B:2-127 [123170]
    automated match to d1p42a1
    complexed with cac, cl, gol, pam, so4, zn

Details for d1yhcb1

PDB Entry: 1yhc (more details), 2.1 Å

PDB Description: Crystal structure of Aquifex aeolicus LpxC deacetylase complexed with cacodylate
PDB Compounds: (B:) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase

SCOPe Domain Sequences for d1yhcb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1yhcb1 d.14.1.7 (B:2-127) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC {Aquifex aeolicus [TaxId: 63363]}

SCOPe Domain Coordinates for d1yhcb1:

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Timeline for d1yhcb1:

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