Lineage for Superfamily d.14.1: Ribosomal protein S5 domain 2-like

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2157367Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
    core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
  4. 2157368Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families) (S)

Families:

  1. 2157369d.14.1.1: Translational machinery components [54212] (4 protein domains)
  2. 2157547d.14.1.2: RNase P protein [54220] (1 protein)
    automatically mapped to Pfam PF00825
  3. 2157558d.14.1.3: DNA gyrase/MutL, second domain [54224] (6 protein domains)
  4. 2157612d.14.1.4: Ribonuclease PH domain 1-like [54229] (11 protein domains)
  5. 2157803d.14.1.5: GHMP Kinase, N-terminal domain [54232] (7 protein domains)
  6. 2157873d.14.1.6: Early switch protein XOL-1, N-terminal domain [89824] (1 protein)
    diverged from the GHMP Kinase family; lost the ATP-binding site
    automatically mapped to Pfam PF09108
  7. 2157878d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (2 protein domains)
    duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site
  8. 2157938d.14.1.8: Hsp90 middle domain [102755] (2 protein domains)
    related to the DNA gyrase/MutL family; contains extra C-terminal alpha/beta subdomain
    automatically mapped to Pfam PF00183
  9. 2157953d.14.1.9: Imidazole glycerol phosphate dehydratase [102766] (2 protein domains)
    duplication; there are two structural repeats of this fold
  10. 2158021d.14.1.10: ATP-dependent protease Lon (La), catalytic domain [102769] (1 protein)
    contains extra C-terminal alpha/beta subdomain
    automatically mapped to Pfam PF05362
  11. 2158063d.14.1.11: YigZ N-terminal domain-like [102772] (2 protein domains)
    modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand is inserted between strands 3 and 4
    automatically mapped to Pfam PF01205
  12. 2158070d.14.1.12: Formaldehyde-activating enzyme, FAE [117795] (1 protein)
    modification of the common fold; contains extra alpha-beta unit after strand 2, the extra strand extends beta-sheet antiparallel to strand 3
    automatically mapped to Pfam PF08714
  13. 2158083d.14.1.0: automated matches [191504] (1 protein)
    not a true family

More info for Superfamily d.14.1: Ribosomal protein S5 domain 2-like

Timeline for Superfamily d.14.1: Ribosomal protein S5 domain 2-like: