SCOPe 2.08: Protein: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC

Lineage for Protein: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC

Root: SCOPe 2.08
Class d: Alpha and beta proteins (a+b) [53931] (396 folds)
Fold d.14: Ribosomal protein S5 domain 2-like [54210] (1 superfamily)
core: beta(3)-alpha-beta-alpha; 2 layers: alpha/beta; left-handed crossover
Superfamily d.14.1: Ribosomal protein S5 domain 2-like [54211] (13 families)

Family d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89827] (2 proteins)
duplication; there are two structural repeats of this fold; each repeat is elaborated with additional structures forming the active site

Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC [89828] (1 species)

Species:

Aquifex aeolicus [TaxId:63363] [89829] (18 PDB entries)
Uniprot O67648 3-270
1. Domains for 1nzt:
  1. Domain d1nzta3: 1nzt A:1-127 [302790]
    automated match to d1xxea1
    complexed with tux, zn
  2. Domain d1nzta4: 1nzt A:128-282 [302791]
    automated match to d1xxea2
    complexed with tux, zn
2. Domains for 1p42:
  1. Domain d1p42a1: 1p42 A:2-127 [87754]
    complexed with myr, zn
  2. Domain d1p42a2: 1p42 A:128-280 [87755]
    complexed with myr, zn
  3. Domain d1p42b1: 1p42 B:2-127 [87756]
    complexed with myr, zn
  4. Domain d1p42b2: 1p42 B:128-280 [87757]
    complexed with myr, zn
3. Domains for 1xxe:
  1. Domain d1xxea1: 1xxe A:3-127 [116157]
    complexed with tux, zn
  2. Domain d1xxea2: 1xxe A:128-270 [116158]
    complexed with tux, zn
4. Domains for 1yh8:
  1. Domain d1yh8a1: 1yh8 A:2-127 [197659]
    automated match to d1p42a1
    complexed with cl, pam, zn
  2. Domain d1yh8a2: 1yh8 A:128-279 [197660]
    automated match to d1p42a2
    complexed with cl, pam, zn
  3. Domain d1yh8b1: 1yh8 B:2-127 [123162]
    automated match to d1p42a1
    complexed with cl, pam, zn
  4. Domain d1yh8b2: 1yh8 B:128-279 [123163]
    automated match to d1p42a2
    complexed with cl, pam, zn
5. Domains for 1yhc:
  1. Domain d1yhca1: 1yhc A:2-127 [123168]
    automated match to d1p42a1
    complexed with cac, cl, gol, pam, so4, zn
  2. Domain d1yhca2: 1yhc A:128-279 [123169]
    automated match to d1p42a2
    complexed with cac, cl, gol, pam, so4, zn
  3. Domain d1yhcb1: 1yhc B:2-127 [123170]
    automated match to d1p42a1
    complexed with cac, cl, gol, pam, so4, zn
  4. Domain d1yhcb2: 1yhc B:128-279 [123171]
    automated match to d1p42a2
    complexed with cac, cl, gol, pam, so4, zn
6. Domains for 2go3:
  1. Domain d2go3a1: 2go3 A:2-127 [135422]
    automated match to d1p42a1
    complexed with cl, gol, imd, myr, plm, zn
  2. Domain d2go3a2: 2go3 A:128-279 [135423]
    automated match to d1p42a2
    complexed with cl, gol, imd, myr, plm, zn
  3. Domain d2go3b1: 2go3 B:2-127 [135424]
    automated match to d1p42a1
    complexed with cl, gol, imd, myr, plm, zn
  4. Domain d2go3b2: 2go3 B:128-279 [135425]
    automated match to d1p42a2
    complexed with cl, gol, imd, myr, plm, zn
7. Domains for 2go4:
  1. Domain d2go4a1: 2go4 A:2-127 [135426]
    automated match to d1p42a1
    complexed with cl, tux, zn
  2. Domain d2go4a2: 2go4 A:128-279 [135427]
    automated match to d1p42a2
    complexed with cl, tux, zn
  3. Domain d2go4b1: 2go4 B:2-127 [135428]
    automated match to d1p42a1
    complexed with cl, tux, zn
  4. Domain d2go4b2: 2go4 B:128-279 [135429]
    automated match to d1p42a2
    complexed with cl, tux, zn
8. Domains for 2ier:
  1. Domain d2iera1: 2ier A:2-133 [137319]
    automated match to d2go3a1
    complexed with gol, plm, udp, zn
  2. Domain d2iera2: 2ier A:134-280 [137320]
    automated match to d1xxea2
    complexed with gol, plm, udp, zn
  3. Domain d2ierb1: 2ier B:2-133 [137321]
    automated match to d2go3a1
    complexed with gol, plm, udp, zn
  4. Domain d2ierb2: 2ier B:134-280 [137322]
    automated match to d1xxea2
    complexed with gol, plm, udp, zn
9. Domains for 2ies:
  1. Domain d2iesa1: 2ies A:2-133 [137323]
    automated match to d2iesa1
    complexed with cl, plm, pop, zn
  2. Domain d2iesa2: 2ies A:134-280 [137324]
    automated match to d1xxea2
    complexed with cl, plm, pop, zn
  3. Domain d2iesb1: 2ies B:2-133 [137325]
    automated match to d2iesa1
    complexed with cl, plm, pop, zn
  4. Domain d2iesb2: 2ies B:134-280 [137326]
    automated match to d1xxea2
    complexed with cl, plm, pop, zn
10. Domains for 2jt2:
  1. Domain d2jt2a1: 2jt2 A:2-127 [148195]
    automated match to d2jt2a1
    complexed with c90, zn
  2. Domain d2jt2a2: 2jt2 A:128-269 [148196]
    automated match to d1xxea2
    complexed with c90, zn
11. Domains for 2o3z:
  1. Domain d2o3za1: 2o3z A:2-133 [138903]
    automated match to d2go3a1
    complexed with ai7, cl, so4, zn
  2. Domain d2o3za2: 2o3z A:134-280 [138904]
    automated match to d1xxea2
    complexed with ai7, cl, so4, zn
  3. Domain d2o3zb1: 2o3z B:2-133 [138905]
    automated match to d2go3a1
    complexed with ai7, cl, so4, zn
  4. Domain d2o3zb2: 2o3z B:134-280 [138906]
    automated match to d1xxea2
    complexed with ai7, cl, so4, zn
12. Domains for 4oze:
  1. Domain d4ozea1: 4oze A:2-127 [258973]
    automated match to d1xxea1
    complexed with 24g, cl, zn
  2. Domain d4ozea2: 4oze A:128-267 [258974]
    automated match to d1xxea2
    complexed with 24g, cl, zn
  3. Domain d4ozeb1: 4oze B:2-127 [258971]
    automated match to d1xxea1
    complexed with 24g, cl, zn
  4. Domain d4ozeb2: 4oze B:128-268 [258972]
    automated match to d1xxea2
    complexed with 24g, cl, zn
13. Domains for 4u3b:
  1. Domain d4u3ba1: 4u3b A:2-127 [260064]
    automated match to d1xxea1
    complexed with 3bw, cl, imd, zn
  2. Domain d4u3ba2: 4u3b A:128-268 [260065]
    automated match to d1xxea2
    complexed with 3bw, cl, imd, zn
14. Domains for 4u3d:
  1. Domain d4u3da1: 4u3d A:2-127 [260447]
    automated match to d1xxea1
    complexed with 3bx, cl, imd, zn
  2. Domain d4u3da2: 4u3d A:128-268 [260448]
    automated match to d1xxea2
    complexed with 3bx, cl, imd, zn
15. Domains for 5dro:
  1. Domain d5droa1: 5dro A:2-127 [313572]
    automated match to d1nzta3
    complexed with act, dms, zh2, zn
  2. Domain d5droa2: 5dro A:128-268 [313573]
    automated match to d1nzta4
    complexed with act, dms, zh2, zn
  3. Domain d5drob1: 5dro B:2-127 [314505]
    automated match to d1nzta3
    complexed with act, dms, zh2, zn
  4. Domain d5drob2: 5dro B:128-268 [314506]
    automated match to d1nzta4
    complexed with act, dms, zh2, zn
16. Domains for 5drp:
  1. Domain d5drpa1: 5drp A:2-127 [313637]
    automated match to d1nzta3
    complexed with 5ep, cl, dms, zn
  2. Domain d5drpa2: 5drp A:128-268 [313638]
    automated match to d1nzta4
    complexed with 5ep, cl, dms, zn
  3. Domain d5drpb1: 5drp B:2-127 [313584]
    automated match to d1nzta3
    complexed with 5ep, cl, dms, zn
  4. Domain d5drpb2: 5drp B:128-268 [313585]
    automated match to d1nzta4
    complexed with 5ep, cl, dms, zn
17. Domains for 5u86:
  1. Domain d5u86a1: 5u86 A:2-127 [337651]
    automated match to d1nzta3
    complexed with 81v, cl, edo, po4, zn
  2. Domain d5u86a2: 5u86 A:128-270 [337652]
    automated match to d1nzta4
    complexed with 81v, cl, edo, po4, zn
18. Domains for 6ih0:
  1. Domain d6ih0a1: 6ih0 A:2-127 [364329]
    automated match to d1xxea1
    complexed with a5f, a5u, zn
  2. Domain d6ih0a2: 6ih0 A:128-268 [364330]
    automated match to d1xxea2
    complexed with a5f, a5u, zn

More info for Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC from d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC

Timeline for Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC from d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC:

Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC from d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC first appeared in SCOP 1.65
Protein UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC from d.14.1.7: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase LpxC appears in SCOPe 2.07