Lineage for d1xpob1 (1xpo B:1-47)

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.140: LEM/SAP HeH motif [63450] (6 superfamilies)
    helix-extended loop-helix; parallel helices
  4. Superfamily a.140.3: Rho N-terminal domain-like [68912] (2 families) (S)
  5. Family a.140.3.1: Rho termination factor, N-terminal domain [68913] (1 protein)
    automatically mapped to Pfam PF07498
  6. Protein Rho termination factor, N-terminal domain [68914] (1 species)
  7. Species Escherichia coli [TaxId:562] [50295] (9 PDB entries)
    Uniprot P03002
  8. Domain d1xpob1: 1xpo B:1-47 [122215]
    Other proteins in same PDB: d1xpoa2, d1xpoa3, d1xpob2, d1xpob3, d1xpoc2, d1xpoc3, d1xpod2, d1xpod3, d1xpoe2, d1xpoe3, d1xpof2, d1xpof3
    automatically matched to d1a8va1
    protein/RNA complex; complexed with ags, bcm, mg

Details for d1xpob1

PDB Entry: 1xpo (more details), 3.15 Å

PDB Description: structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin
PDB Compounds: (B:) Rho transcription termination factor

SCOPe Domain Sequences for d1xpob1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1xpob1 a.140.3.1 (B:1-47) Rho termination factor, N-terminal domain {Escherichia coli [TaxId: 562]}
mnltelkntpvselitlgenmglenlarmrkqdiifailkqhaksge

SCOPe Domain Coordinates for d1xpob1 are not available.

Timeline for d1xpob1:

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Domains from same chain:
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d1xpob2, d1xpob3
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Domains from other chains:
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d1xpoa1, d1xpoa2, d1xpoa3, d1xpoc1, d1xpoc2, d1xpoc3, d1xpod1, d1xpod2, d1xpod3, d1xpoe1, d1xpoe2, d1xpoe3, d1xpof1, d1xpof2, d1xpof3