SCOPe 2.08: Domain d1wrba1: 1wrb A:164-401

Lineage for d1wrba1 (1wrb A:164-401)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.19: Tandem AAA-ATPase domain [81268] (41 proteins)
   duplication: tandem repeat of two RecA-like (AAA) domains

6. Protein putative ATP-dependent RNA helicase VlgB [142306] (1 species)

7. Species Flatworm (Dugesia japonica) [TaxId:6161] [142307] (1 PDB entry)
   Uniprot O97032 164-401

8. Domain d1wrba1: 1wrb A:164-401 [121192]
   Other proteins in same PDB: d1wrbb_
   C-terminal domain
   complexed with so4
   has additional insertions and/or extensions that are not grouped together

Details for d1wrba1

PDB Entry: 1wrb, 2.4 Å

PDB Description: Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase

PDB Compounds: (A:) DjVLGB

SCOPe Domain Sequences for d1wrba1:

Sequence, based on SEQRES records:

>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
kydsipvsvtgpdysatnvienfdelkldptirnnillasyqrptpiqknaipailehrd
imacaqtgsgktaaflipiinhlvcqdlnqqrysktaypkclilaptrelaiqilsesqk
fslntplrscvvyggadthsqirevqmgchllvatpgrlvdfieknkislefckyivlde
adrmldmgfepqirkiieesnmpsginrqtlmfsatfpkeiqklaadflynyifmtvg

Sequence, based on observed residues (ATOM records):

>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
kydsipvsvtgpdysatnvienfdelkldptirnnillasyqrptpiqknaipailehrd
imacaqtgsgktaaflipiinhlvcqdlktaypkclilaptrelaiqilsesqkfslntp
lrscvvyggadthsqirevqmgchllvatpgrlvdfieknkislefckyivldeadrmld
mgfepqirkiieesnmpsginrqtlmfsatfpkeiqklaadflynyifmtvg

Timeline for d1wrba1:

• d1wrba1 first appeared in SCOP 1.73
  
• d1wrba1 appears in SCOPe 2.07