Lineage for d1vyvb2 (1vyv B:216-402)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2109205Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 protein domains)
    parallel beta-sheet of 5 strands, order 23145
  6. 2109544Protein Guanylate kinase-like domain of the L-type calcium channel [110527] (2 species)
  7. 2109545Species Norway rat (Rattus norvegicus) [TaxId:10116] [110529] (5 PDB entries)
    Uniprot P54287 38-362
  8. 2109553Domain d1vyvb2: 1vyv B:216-402 [108921]
    Other proteins in same PDB: d1vyva1, d1vyvb1
    beta4 isoform with odd numbering

Details for d1vyvb2

PDB Entry: 1vyv (more details), 3 Å

PDB Description: beta4 subunit of ca2+ channel
PDB Compounds: (B:) calcium channel beta-4subunit

SCOPe Domain Sequences for d1vyvb2:

Sequence, based on SEQRES records: (download)

>d1vyvb2 c.37.1.1 (B:216-402) Guanylate kinase-like domain of the L-type calcium channel {Norway rat (Rattus norvegicus) [TaxId: 10116]}
psmrpvvlvgpslkgyevtdmmqkalfdflkhrfdgrisitrvtadislakrsvlnnpsk
raiiersntksslaevqseierifelarslqlvvldadtinhpaqliktslapiivhvkv
sspkvlqrliksrgksqskhlnvqlvaadklaqcppemfdvildenqledacehlgeyle
aywrath

Sequence, based on observed residues (ATOM records): (download)

>d1vyvb2 c.37.1.1 (B:216-402) Guanylate kinase-like domain of the L-type calcium channel {Norway rat (Rattus norvegicus) [TaxId: 10116]}
psmrpvvlvgpslkgyevtdmmqkalfdflkhrfdgrisitrvtadislaksslaevqse
ierifelarslqlvvldadtinhpaqliktslapiivhvkvsspkvlqrliksrgksqsk
hlnvqlvaadklaqcppemfdvildenqledacehlgeyleaywrath

SCOPe Domain Coordinates for d1vyvb2:

Click to download the PDB-style file with coordinates for d1vyvb2.
(The format of our PDB-style files is described here.)

Timeline for d1vyvb2:

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Domains from same chain:
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d1vyvb1