SCOPe 2.08: Domain d1t5rd_: 1t5r D:

Lineage for d1t5rd_ (1t5r D:)

1. Root: SCOPe 2.08

2. Class f: Membrane and cell surface proteins and peptides [56835] (69 folds)

3. Fold f.6: Leukocidin-like [56958] (1 superfamily)
   subunit fold contains beta-sandwich of Ig-like (greek-key) topology and a beta-ribbon arm that forms an oligomeric transmembrane barrel

4. Superfamily f.6.1: Leukocidin-like [56959] (3 families)

5. Family f.6.1.1: Leukocidin (pore-forming toxin) [56960] (5 proteins)
   heptameric fold contains barrel (n=14, S=14) formed by beta-ribbon arms, one from each subunit
   automatically mapped to Pfam PF07968

6. Protein Leucocidin S component LukS-PV [111373] (1 species)

7. Species Staphylococcus aureus bacteriophage PVL [TaxId:71366] [111374] (1 PDB entry)
   Uniprot O80066

8. Domain d1t5rd_: 1t5r D: [106468]

Details for d1t5rd_

PDB Entry: 1t5r, 2 Å

PDB Description: structure of the panton-valentine leucocidin s component from staphylococcus aureus

PDB Compounds: (D:) LukS-PV

SCOPe Domain Sequences for d1t5rd_:

Sequence, based on SEQRES records:

>d1t5rd_ f.6.1.1 (D:) Leucocidin S component LukS-PV {Staphylococcus aureus bacteriophage PVL [TaxId: 71366]}
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsgps
tggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvgyk
pysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrr
tthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

Sequence, based on observed residues (ATOM records):

>d1t5rd_ f.6.1.1 (D:) Leucocidin S component LukS-PV {Staphylococcus aureus bacteriophage PVL [TaxId: 71366]}
nienigaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyynyk
ntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnssfnys
ktisynqqnyisevehqnsksvqwgikansfitgkmsghdpnlfvgykpysqnprdyfvp
dnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrttnsylegsrih
nafvnrnytvkyevnwktheikvkghn

Timeline for d1t5rd_:

• d1t5rd_ first appeared in SCOP 1.69
  
• d1t5rd_ appears in SCOPe 2.07