PDB entry 1t5r

View 1t5r on RCSB PDB site
Description: structure of the panton-valentine leucocidin s component from staphylococcus aureus
Class: unknown function
Keywords: bi-component leucotoxin, pore-forming toxin, staphylococcus aureus, s component leucocidin,, unknown function
Deposited on 2004-05-05, released 2004-08-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.209
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5ra_
  • Chain 'B':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5rb_
  • Chain 'C':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5rc_
  • Chain 'D':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5rd_
  • Chain 'E':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5re_
  • Chain 'F':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5rf_
  • Chain 'G':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5rg_
  • Chain 'H':
    Compound: LukS-PV
    Species: Staphylococcus phage PVL [TaxId:71366]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d1t5rh_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >1t5rA (A:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rA (A:)
nienigaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyynyk
ntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnssfnys
ktisynqqnyisevehqnsksvqwgikansfitkmsghdpnlfvgykpysqnprdyfvpd
nelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrtnsylegsrihna
fvnrnytvkyevnwktheikvkghn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >1t5rB (B:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rB (B:)
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsggs
fnysktisynqqnyisevehqnsksvqwgikansfgkmsghdpnlfvgykpysqnprdyf
vpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrtthgnsyleg
srihnafvnrnytvkyevnwktheikvkghn

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >1t5rC (C:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rC (C:)
ienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyny
kntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsfnys
ktisynqqnyisevehqnsksvqwgikansfitgkmsghdpnlfvgykpysqnprdyfvp
dnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrttygnsylegsr
ihnafvnrnytvkyevnwktheikvkghn

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >1t5rD (D:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rD (D:)
nienigaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyynyk
ntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnssfnys
ktisynqqnyisevehqnsksvqwgikansfitgkmsghdpnlfvgykpysqnprdyfvp
dnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrttnsylegsrih
nafvnrnytvkyevnwktheikvkghn

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >1t5rE (E:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rE (E:)
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsggs
fnysktisynqqnyisevehqnsksvqwgikansfkmsghdpnlfvgykpysqnprdyfv
pdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrtthygnsyleg
srihnafvnrnytvkyevnwktheikvkghn

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >1t5rF (F:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rF (F:)
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsgsf
nysktisynqqnyisevehqnsksvqwgikansfigkmsghdpnlfvgykpysqnprdyf
vpdnelpplvhsgfnpsfiatvshekggdtsefeitygrnmdvthatrrttgnsylegsr
ihnafvnrnytvkyevnwktheikvkghn

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >1t5rG (G:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rG (G:)
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnssfn
ysktisynqqnyisevehqnsksvqwgikansfkmsghdpnlfvgykpysqnprdyfvpd
nelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrtthygnsylegsr
ihnafvnrnytvkyevnwktheikvkghn

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >1t5rH (H:)
dnnienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinsktty
ynykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsg
pstggngsfnysktisynqqnyisevehqnsksvqwgikansfitslgkmsghdpnlfvg
ykpysqnprdyfvpdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthat
rrtthygnsylegsrihnafvnrnytvkyevnwktheikvkghn

    Sequence, based on observed residues (ATOM records): (download) 
    >1t5rH (H:)
nienigdgaevvkrtedtssdkwgvtqniqfdfvkdkkynkdalilkmqgfinskttyyn
ykntdhikamrwpfqyniglktndpnvdlinylpknkidsvnvsqtlgyniggnfnsfny
sktisynqqnyisevehqnsksvqwgikansfitgkmsghdpnlfvgykpysqnprdyfv
pdnelpplvhsgfnpsfiatvshekgsgdtsefeitygrnmdvthatrrttygnsylegs
rihnafvnrnytvkyevnwktheikvkghn