Lineage for Species: Streptomyces venezuelae [TaxId: 54571]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

    has additional subdomain(s) that are not in the common domain
  6. Protein dTDP-glucose 4,6-dehydratase (RmlB) [51755] (4 species)
  7. Species Streptomyces venezuelae [TaxId:54571] [102133] (2 PDB entries)

PDB entries in Species: Streptomyces venezuelae [TaxId: 54571]:

  1. Domain(s) for 1r66:
    • Domain d1r66a_: 1r66 A: [97146]
      complexed with cl, nad, tyd
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1r6d:
    • Domain d1r6da_: 1r6d A: [97148]
      complexed with dau, nad; mutant
      has additional subdomain(s) that are not in the common domain

More info for Species Streptomyces venezuelae [TaxId:54571] from c.2.1.2 dTDP-glucose 4,6-dehydratase (RmlB)

Timeline for Species Streptomyces venezuelae [TaxId:54571] from c.2.1.2 dTDP-glucose 4,6-dehydratase (RmlB):