PDB entry 6dfv

View 6dfv on RCSB PDB site
Description: Mouse diabetogenic TCR 8F10
Class: immune system
Keywords: T cell receptor, Type 1 Diabetes, Autoimmunity, IMMUNE SYSTEM
Deposited on 2018-05-15, released 2019-04-17
The last revision prior to the SCOPe 2.07 freeze date was dated 2019-04-17, with a file datestamp of 2019-04-12.
Experiment type: XRAY
Resolution: 1.71 Å
R-factor: N/A
AEROSPACI score: 0.39 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TcR alpha chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6DFV
    Domains in SCOPe 2.07: d6dfva1, d6dfva2
  • Chain 'B':
    Compound: TCR beta chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6DFV (Start-240)
    Domains in SCOPe 2.07: d6dfvb1, d6dfvb2
  • Chain 'C':
    Compound: TcR alpha chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6DFV
    Domains in SCOPe 2.07: d6dfvc1, d6dfvc2
  • Chain 'D':
    Compound: TCR beta chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 6DFV (Start-240)
    Domains in SCOPe 2.07: d6dfvd1, d6dfvd2
  • Heterogens: EDO, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >6dfvA (A:)
meqveqlpsilrvqegssasincsyedsasnyfpwykqepgenpkliidirsnmerkqtq
glivlldkkakrfslhitdtqpgdsamyfcaasrrgsggsnykltfgkgtlltvtpniqn
pdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsava
wsnksdfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >6dfvA (A:)
eqveqlpsilrvqegssasincsyedsasnyfpwykqepgenpkliidirsnmerkqtqg
livlldkkakrfslhitdtqpgdsamyfcaasrrggsnykltfgkgtlltvtpniqnpdp
avyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsn
ksdfacanaf

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >6dfvB (B:)
mavtqsprnkvavtggkvtlscdqtnnhnnmywyrqdtghglrlihysygagstekgdip
dgykasrpsqkefslilelatpsqtsvyfcasgglggdeqyfgpgtrltvledlknvfpp
evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
d

    Sequence, based on observed residues (ATOM records): (download) 
    >6dfvB (B:)
avtqsprnkvavtggkvtlscdqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqkefslilelatpsqtsvyfcasgglggdeqyfgpgtrltvledlknvfppe
vavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpaln
dsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgrad

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >6dfvC (C:)
meqveqlpsilrvqegssasincsyedsasnyfpwykqepgenpkliidirsnmerkqtq
glivlldkkakrfslhitdtqpgdsamyfcaasrrgsggsnykltfgkgtlltvtpniqn
pdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsava
wsnksdfacanafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >6dfvC (C:)
qveqlpsilrvqegssasincsyedsasnyfpwykqepgenpkliidirsnmerkqtqgl
ivlldkkakrfslhitdtqpgdsamyfcaasrrgsnykltfgkgtlltvtpniqnpdpav
yqlrdsksdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksd
facanafnnsiipedtffps

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >6dfvD (D:)
mavtqsprnkvavtggkvtlscdqtnnhnnmywyrqdtghglrlihysygagstekgdip
dgykasrpsqkefslilelatpsqtsvyfcasgglggdeqyfgpgtrltvledlknvfpp
evavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpal
ndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgra
d

    Sequence, based on observed residues (ATOM records): (download) 
    >6dfvD (D:)
avtqsprnkvavtggkvtlscdqtnnhnnmywyrqdtghglrlihysygagstekgdipd
gykasrpsqkefslilelatpsqtsvyfcasgglggdeqyfgpgtrltvledlknvfppe
vavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpaln
dsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgrad