Lineage for d1oc2a_ (1oc2 A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2841004Fold c.2: NAD(P)-binding Rossmann-fold domains [51734] (1 superfamily)
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. 2841005Superfamily c.2.1: NAD(P)-binding Rossmann-fold domains [51735] (13 families) (S)
  5. 2841375Family c.2.1.2: Tyrosine-dependent oxidoreductases [51751] (73 proteins)
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7

    has additional subdomain(s) that are not in the common domain
  6. 2842012Protein dTDP-glucose 4,6-dehydratase (RmlB) [51755] (4 species)
  7. 2842021Species Streptococcus suis, serotype 2 [TaxId:1307] [69406] (6 PDB entries)
  8. 2842026Domain d1oc2a_: 1oc2 A: [92765]
    complexed with nad, so4, tdx
    has additional subdomain(s) that are not in the common domain

Details for d1oc2a_

PDB Entry: 1oc2 (more details), 1.5 Å

PDB Description: the structure of nadh in the dtdp-d-glucose dehydratase (rmlb) enzyme
PDB Compounds: (A:) dtdp-glucose 4,6-dehydratase

SCOPe Domain Sequences for d1oc2a_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}
qfkniivtggagfigsnfvhyvynnhpdvhvtvldkltyagnkanleailgdrvelvvgd
iadaelvdklaakadaivhyaaeshndnslndpspfihtnfigtytlleaarkydirfhh
vstdevygdlplredlpghgegpgekftaetnynpsspysstkaasdlivkawvrsfgvk
atisncsnnygpyqhiekfiprqitnilagikpklygegknvrdwihtndhstgvwailt
kgrmgetyligadgeknnkevlelilekmgqpkdaydhvtdraghdlryaidasklrdel
gwtpqftdfsegleetiqwytdnqdwwkaekeaveanyaktqevik

SCOPe Domain Coordinates for d1oc2a_:

Click to download the PDB-style file with coordinates for d1oc2a_.
(The format of our PDB-style files is described here.)

Timeline for d1oc2a_: