Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.116: alpha/beta knot [75216] (1 superfamily) core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot |
Superfamily c.116.1: alpha/beta knot [75217] (9 families) known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily all known members have dimeric structures |
Family c.116.1.4: tRNA(m1G37)-methyltransferase TrmD [89629] (2 proteins) fold and dimerisation mode are similar to those of the YbeA-like family; contains additional C-terminal all-alpha subdomain |
Protein tRNA(m1G37)-methyltransferase TrmD [89630] (3 species) |
Species Haemophilus influenzae [TaxId:727] [89631] (4 PDB entries) |
Domain d1uala1: 1ual A:1-246 [88383] Other proteins in same PDB: d1uala2, d1uala3 complexed with sah |
PDB Entry: 1ual (more details), 1.8 Å
SCOPe Domain Sequences for d1uala1:
Sequence, based on SEQRES records: (download)
>d1uala1 c.116.1.4 (A:1-246) tRNA(m1G37)-methyltransferase TrmD {Haemophilus influenzae [TaxId: 727]} mwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddrpygggpgm lmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvcgryegide rliqteideewsigdyvltggelpamtlidavarfipgvlgkqasaeedsfadglldcph ytrpevlegltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllkea qaehns
>d1uala1 c.116.1.4 (A:1-246) tRNA(m1G37)-methyltransferase TrmD {Haemophilus influenzae [TaxId: 727]} mwigvislfpemfkaitefgvtgravkhnllkvecwnprdftfdkhktvddrpygggpgm lmmvqplrdaihtakaaagegakviylspqgrkldqggvtelaqnqklilvcgryegide rliqteideewsigdyvltggelpamtlidavarfipgvlsfadglldcphytrpevleg ltvppvlmsghheeirkwrlkqslqrtwlrrpelleglaltdeqrkllkeaqaehns
Timeline for d1uala1: