SCOPe 2.08: Protein: Endonuclease VIII

Lineage for Protein: Endonuclease VIII

Root: SCOPe 2.08
Class g: Small proteins [56992] (100 folds)
Fold g.39: Glucocorticoid receptor-like (DNA-binding domain) [57715] (1 superfamily)
alpha+beta metal(zinc)-bound fold
Superfamily g.39.1: Glucocorticoid receptor-like (DNA-binding domain) [57716] (19 families)
Family g.39.1.8: C-terminal, Zn-finger domain of MutM-like DNA repair proteins [81627] (3 proteins)
Protein Endonuclease VIII [82917] (1 species)

Species:

Escherichia coli [TaxId:562] [82918] (8 PDB entries)
Uniprot P50465
1. Domain for 1k3w:
  - Domain d1k3wa3: 1k3w A:223-262 [77241]
    Other proteins in same PDB: d1k3wa1, d1k3wa2
    protein/DNA complex; complexed with so4, zn
2. Domain for 1k3x:
  - Domain d1k3xa3: 1k3x A:223-262 [77244]
    Other proteins in same PDB: d1k3xa1, d1k3xa2
    protein/DNA complex; complexed with gol, so4, zn
3. Domain for 1q39:
  - Domain d1q39a3: 1q39 A:217-262 [104517]
    Other proteins in same PDB: d1q39a1, d1q39a2
    complexed with ca, zn
4. Domain for 1q3b:
  - Domain d1q3ba3: 1q3b A:217-262 [104520]
    Other proteins in same PDB: d1q3ba1, d1q3ba2
    complexed with gol, mg, zn; mutant
5. Domain for 1q3c:
  - Domain d1q3ca3: 1q3c A:217-262 [104523]
    Other proteins in same PDB: d1q3ca1, d1q3ca2
    complexed with gol, mg, zn; mutant
6. Domain for 2ea0:
  - Domain d2ea0a3: 2ea0 A:223-262 [146756]
    Other proteins in same PDB: d2ea0a1, d2ea0a2
    automated match to d1k3wa3
    protein/DNA complex; complexed with gol, so4, zn
7. Domain for 2opf:
  - Domain d2opfa3: 2opf A:223-262 [148965]
    Other proteins in same PDB: d2opfa1, d2opfa2
    automated match to d1q3ba3
    protein/DNA complex; complexed with gol, so4, zn
8. Domains for 2oq4:
  1. Domain d2oq4a3: 2oq4 A:224-262 [148980]
    Other proteins in same PDB: d2oq4a1, d2oq4a2, d2oq4b1, d2oq4b2
    automated match to d1k3xa3
    protein/DNA complex; complexed with na, so4, zn
  2. Domain d2oq4b3: 2oq4 B:223-262 [148983]
    Other proteins in same PDB: d2oq4a1, d2oq4a2, d2oq4b1, d2oq4b2
    automated match to d1k3xa3
    protein/DNA complex; complexed with na, so4, zn

More info for Protein Endonuclease VIII from g.39.1.8: C-terminal, Zn-finger domain of MutM-like DNA repair proteins

Timeline for Protein Endonuclease VIII from g.39.1.8: C-terminal, Zn-finger domain of MutM-like DNA repair proteins:

Protein Endonuclease VIII from g.39.1.8: C-terminal, Zn-finger domain of MutM-like DNA repair proteins first appeared in SCOP 1.63
Protein Endonuclease VIII from g.39.1.8: C-terminal, Zn-finger domain of MutM-like DNA repair proteins appears in SCOPe 2.07