SCOPe Funding Alert: SCOPe support from the NIH ended in April 2016. John-Marc Chandonia is the primary maintainer and has continued to develop SCOPe using vacation time. Three proposals to the NIH for continued funding have been unsuccessful. If our current NIH proposal is not funded, SCOPe will shut down permanently in Summer 2017 as Dr. Chandonia will need to seek a new position.

Lineage for Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits

  1. Root: SCOPe 2.06
  2. 2223823Class f: Membrane and cell surface proteins and peptides [56835] (59 folds)
  3. 2227758Fold f.26: Bacterial photosystem II reaction centre, L and M subunits [81484] (1 superfamily)
    five transmembrane helices forming a sheet-like structure
  4. 2227759Superfamily f.26.1: Bacterial photosystem II reaction centre, L and M subunits [81483] (1 family) (S)
    automatically mapped to Pfam PF00124
  5. 2227760Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits [81482] (5 protein domains)
    L and M are probably related to each other

Protein Domains:

  1. 2227761L (light) subunit [81477] (3 species)
    1. 2227762Species Rhodobacter sphaeroides [TaxId:1063] [81475] (62 PDB entries)
      Uniprot P02954
    2. 2227832Species Rhodopseudomonas viridis [TaxId:1079] [81474] (12 PDB entries)
    3. 2227845Species Thermochromatium tepidum [TaxId:1050] [81476] (1 PDB entry)
  2. 2227847M (medium) subunit [81481] (4 species)
    1. 2227848Species Rhodobacter sphaeroides [TaxId:1063] [81479] (60 PDB entries)
      Uniprot P02953
    2. 2227917Species Rhodopseudomonas viridis [TaxId:1079] [81478] (12 PDB entries)
    3. 2227930Species Thermochromatium tepidum [TaxId:1050] [81480] (1 PDB entry)
    4. 2282682Species Rhodobacter sphaeroides [TaxId:272943] [325983] (1 PDB entry)
  3. 2227932Photosystem II reaction center d2 protein PsbD2 [161051] (2 species)
    1. 2227933Species Thermosynechococcus elongatus [TaxId:146786] [161052] (2 PDB entries)
      Uniprot Q8CM25 13-352
    2. 2227936Species Thermosynechococcus vulcanus [TaxId:32053] [267724] (1 PDB entry)
  4. 2227938Photosystem Q(B) protein 1, PsbA1 [161053] (2 species)
    1. 2227939Species Thermosynechococcus elongatus [TaxId:146786] [161054] (1 PDB entry)
      Uniprot P0A445 10-344
    2. 2227941Species Thermosynechococcus vulcanus [TaxId:32053] [196646] (2 PDB entries)
  5. 2227944automated matches [190224] (8 species)
    not a true protein
    1. 2227945Species Blastochloris viridis [TaxId:1079] [187141] (7 PDB entries)
    2. 2227960Species Rhodobacter sphaeroides [TaxId:1063] [186985] (33 PDB entries)
    3. 2228022Species Rhodopseudomonas viridis [TaxId:1079] [189054] (2 PDB entries)
    4. 2228027Species Thermochromatium tepidum [TaxId:1050] [267912] (3 PDB entries)
    5. 2228031Species Thermosynechococcus elongatus [TaxId:197221] [260543] (4 PDB entries)
    6. 2228033Species Thermosynechococcus elongatus [TaxId:32046] [188744] (2 PDB entries)
    7. 2228038Species Thermosynechococcus vulcanus [TaxId:32053] [189911] (7 PDB entries)
    8. 2282721Species Rhodobacter sphaeroides [TaxId:272943] [326022] (1 PDB entry)

More info for Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits

Timeline for Family f.26.1.1: Bacterial photosystem II reaction centre, L and M subunits: