Class b: All beta proteins [48724] (174 folds) |
Fold b.38: Sm-like fold [50181] (5 superfamilies) core: barrel, open; n*=4, S*=8; meander; SH3-like topology |
Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) |
Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (8 proteins) forms homo and heteroheptameric ring structures |
Protein Archaeal homoheptameric Sm protein [63758] (6 species) |
Archaeoglobus fulgidus, AF-Sm1 [TaxId:2234] [63761] (2 PDB entries) |
Domain d1i4k1_: 1i4k 1: [61690] complexed with cit |
Domain d1i4k2_: 1i4k 2: [61691] complexed with cit |
Domain d1i4ka_: 1i4k A: [61692] complexed with cit |
Domain d1i4kb_: 1i4k B: [61693] complexed with cit |
Domain d1i4kc_: 1i4k C: [61694] complexed with cit |
Domain d1i4kd_: 1i4k D: [61695] complexed with cit |
Domain d1i4ke_: 1i4k E: [61696] complexed with cit |
Domain d1i4kf_: 1i4k F: [61697] complexed with cit |
Domain d1i4kg_: 1i4k G: [61698] complexed with cit |
Domain d1i4kh_: 1i4k H: [61699] complexed with cit |
Domain d1i4ki_: 1i4k I: [61700] complexed with cit |
Domain d1i4kj_: 1i4k J: [61701] complexed with cit |
Domain d1i4kk_: 1i4k K: [61702] complexed with cit |
Domain d1i4kl_: 1i4k L: [61703] complexed with cit |
Domain d1i4km_: 1i4k M: [61704] complexed with cit |
Domain d1i4kn_: 1i4k N: [61705] complexed with cit |
Domain d1i4ko_: 1i4k O: [61706] complexed with cit |
Domain d1i4kp_: 1i4k P: [61707] complexed with cit |
Domain d1i4kq_: 1i4k Q: [61708] complexed with cit |
Domain d1i4kr_: 1i4k R: [61709] complexed with cit |
Domain d1i4ks_: 1i4k S: [61710] complexed with cit |
Domain d1i4kt_: 1i4k T: [61711] complexed with cit |
Domain d1i4ku_: 1i4k U: [61712] complexed with cit |
Domain d1i4kv_: 1i4k V: [61713] complexed with cit |
Domain d1i4kw_: 1i4k W: [61714] complexed with cit |
Domain d1i4kx_: 1i4k X: [61715] complexed with cit |
Domain d1i4ky_: 1i4k Y: [61716] complexed with cit |
Domain d1i4kz_: 1i4k Z: [61717] complexed with cit |
Domain d1i5la_: 1i5l A: [61791] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lb_: 1i5l B: [61792] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lc_: 1i5l C: [61793] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5ld_: 1i5l D: [61794] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5le_: 1i5l E: [61795] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lf_: 1i5l F: [61796] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lg_: 1i5l G: [61797] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lh_: 1i5l H: [61798] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5li_: 1i5l I: [61799] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lj_: 1i5l J: [61800] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lk_: 1i5l K: [61801] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5ll_: 1i5l L: [61802] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5lm_: 1i5l M: [61803] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Domain d1i5ln_: 1i5l N: [61804] complexed with short poly-U RNA protein/RNA complex; complexed with uri |
Archaeoglobus fulgidus, AF-Sm2 [TaxId:2234] [74938] (1 PDB entry) |
Domain d1ljoa_: 1ljo A: [73941] complexed with acy, cd |
Methanobacterium thermoautotrophicum [TaxId:145262] [63759] (5 PDB entries) MTH649, smap1 |
Domain d1i81a_: 1i81 A: [61930] |
Domain d1i81b_: 1i81 B: [61931] |
Domain d1i81c_: 1i81 C: [61932] |
Domain d1i81d_: 1i81 D: [61933] |
Domain d1i81e_: 1i81 E: [61934] |
Domain d1i81f_: 1i81 F: [61935] |
Domain d1i81g_: 1i81 G: [61936] |
Domain d1jbma_: 1jbm A: [84143] structural genomics complexed with acy, edo |
Domain d1jbmb_: 1jbm B: [84144] structural genomics complexed with acy, edo |
Domain d1jbmc_: 1jbm C: [84145] structural genomics complexed with acy, edo |
Domain d1jbmd_: 1jbm D: [84146] structural genomics complexed with acy, edo |
Domain d1jbme_: 1jbm E: [84147] structural genomics complexed with acy, edo |
Domain d1jbmf_: 1jbm F: [84148] structural genomics complexed with acy, edo |
Domain d1jbmg_: 1jbm G: [84149] structural genomics complexed with acy, edo |
Domain d1jria_: 1jri A: [67121] complexed with cl, edo |
Domain d1jrib_: 1jri B: [67122] complexed with cl, edo |
Domain d1jric_: 1jri C: [67123] complexed with cl, edo |
Domain d1jrid_: 1jri D: [67124] complexed with cl, edo |
Domain d1jrie_: 1jri E: [67125] complexed with cl, edo |
Domain d1jrif_: 1jri F: [67126] complexed with cl, edo |
Domain d1jrig_: 1jri G: [67127] complexed with cl, edo |
Domain d1jrih_: 1jri H: [67128] complexed with cl, edo |
Domain d1jrii_: 1jri I: [67129] complexed with cl, edo |
Domain d1jrij_: 1jri J: [67130] complexed with cl, edo |
Domain d1jrik_: 1jri K: [67131] complexed with cl, edo |
Domain d1jril_: 1jri L: [67132] complexed with cl, edo |
Domain d1jrim_: 1jri M: [67133] complexed with cl, edo |
Domain d1jrin_: 1jri N: [67134] complexed with cl, edo |
Domain d1loja_: 1loj A: [84650] complexed with mpd, u, uri |
Domain d1lojb_: 1loj B: [84651] complexed with mpd, u, uri |
Domain d1lojc_: 1loj C: [84652] complexed with mpd, u, uri |
Domain d1lojd_: 1loj D: [84653] complexed with mpd, u, uri |
Domain d1loje_: 1loj E: [84654] complexed with mpd, u, uri |
Domain d1lojf_: 1loj F: [84655] complexed with mpd, u, uri |
Domain d1lojg_: 1loj G: [84656] complexed with mpd, u, uri |
Domain d1lojh_: 1loj H: [84657] complexed with mpd, u, uri |
Domain d1loji_: 1loj I: [84658] complexed with mpd, u, uri |
Domain d1lojj_: 1loj J: [84659] complexed with mpd, u, uri |
Domain d1lojk_: 1loj K: [84660] complexed with mpd, u, uri |
Domain d1lojl_: 1loj L: [84661] complexed with mpd, u, uri |
Domain d1lojm_: 1loj M: [84662] complexed with mpd, u, uri |
Domain d1lojn_: 1loj N: [84663] complexed with mpd, u, uri |
Domain d1mgqa_: 1mgq A: [79099] |
Domain d1mgqb_: 1mgq B: [79100] |
Domain d1mgqc_: 1mgq C: [79101] |
Domain d1mgqd_: 1mgq D: [79102] |
Domain d1mgqe_: 1mgq E: [79103] |
Domain d1mgqf_: 1mgq F: [79104] |
Domain d1mgqg_: 1mgq G: [79105] |
Pyrobaculum aerophilum [TaxId:13773] [63760] (2 PDB entries) smap1 |
Domain d1i8fa_: 1i8f A: [61959] complexed with gol |
Domain d1i8fb_: 1i8f B: [61960] complexed with gol |
Domain d1i8fc_: 1i8f C: [61961] complexed with gol |
Domain d1i8fd_: 1i8f D: [61962] complexed with gol |
Domain d1i8fe_: 1i8f E: [61963] complexed with gol |
Domain d1i8ff_: 1i8f F: [61964] complexed with gol |
Domain d1i8fg_: 1i8f G: [61965] complexed with gol |
Domain d1lnxa_: 1lnx A: [84642] complexed with acy, gol, uri |
Domain d1lnxb_: 1lnx B: [84643] complexed with acy, gol, uri |
Domain d1lnxc_: 1lnx C: [84644] complexed with acy, gol, uri |
Domain d1lnxd_: 1lnx D: [84645] complexed with acy, gol, uri |
Domain d1lnxe_: 1lnx E: [84646] complexed with acy, gol, uri |
Domain d1lnxf_: 1lnx F: [84647] complexed with acy, gol, uri |
Domain d1lnxg_: 1lnx G: [84648] complexed with acy, gol, uri |
Pyrococcus abyssi [TaxId:29292] [82089] (2 PDB entries) |
Domain d1h641_: 1h64 1: [76675] |
Domain d1h642_: 1h64 2: [76676] |
Domain d1h64a_: 1h64 A: [76677] |
Domain d1h64b_: 1h64 B: [76678] |
Domain d1h64c_: 1h64 C: [76679] |
Domain d1h64d_: 1h64 D: [76680] |
Domain d1h64e_: 1h64 E: [76681] |
Domain d1h64f_: 1h64 F: [76682] |
Domain d1h64g_: 1h64 G: [76683] |
Domain d1h64h_: 1h64 H: [76684] |
Domain d1h64i_: 1h64 I: [76685] |
Domain d1h64j_: 1h64 J: [76686] |
Domain d1h64k_: 1h64 K: [76687] |
Domain d1h64l_: 1h64 L: [76688] |
Domain d1h64m_: 1h64 M: [76689] |
Domain d1h64n_: 1h64 N: [76690] |
Domain d1h64o_: 1h64 O: [76691] |
Domain d1h64p_: 1h64 P: [76692] |
Domain d1h64q_: 1h64 Q: [76693] |
Domain d1h64r_: 1h64 R: [76694] |
Domain d1h64s_: 1h64 S: [76695] |
Domain d1h64t_: 1h64 T: [76696] |
Domain d1h64u_: 1h64 U: [76697] |
Domain d1h64v_: 1h64 V: [76698] |
Domain d1h64w_: 1h64 W: [76699] |
Domain d1h64x_: 1h64 X: [76700] |
Domain d1h64y_: 1h64 Y: [76701] |
Domain d1h64z_: 1h64 Z: [76702] |
Domain d1m8va_: 1m8v A: [78814] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vb_: 1m8v B: [78815] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vc_: 1m8v C: [78816] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vd_: 1m8v D: [78817] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8ve_: 1m8v E: [78818] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vf_: 1m8v F: [78819] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vg_: 1m8v G: [78820] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vh_: 1m8v H: [78821] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vi_: 1m8v I: [78822] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vj_: 1m8v J: [78823] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vk_: 1m8v K: [78824] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vl_: 1m8v L: [78825] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vm_: 1m8v M: [78826] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Domain d1m8vn_: 1m8v N: [78827] complexed with a uridine heptamer protein/RNA complex; complexed with ca, u |
Sulfolobus solfataricus [TaxId:2287] [141290] (1 PDB entry) Uniprot Q97ZQ0 1-76 SnRNP-2 |
Domain d1th7a1: 1th7 A:3-78 [119264] |
Domain d1th7b_: 1th7 B: [119265] automated match to d1th7a1 |
Domain d1th7c_: 1th7 C: [119266] automated match to d1th7a1 |
Domain d1th7d_: 1th7 D: [119267] automated match to d1th7a1 |
Domain d1th7e_: 1th7 E: [119268] automated match to d1th7a1 |
Domain d1th7f_: 1th7 F: [119269] automated match to d1th7a1 |
Domain d1th7g_: 1th7 G: [119270] automated match to d1th7a1 |
Domain d1th7h_: 1th7 H: [119271] automated match to d1th7a1 |
Domain d1th7i_: 1th7 I: [119272] automated match to d1th7a1 |
Domain d1th7j_: 1th7 J: [119273] automated match to d1th7a1 |
Domain d1th7k_: 1th7 K: [119274] automated match to d1th7a1 |
Domain d1th7l_: 1th7 L: [119275] automated match to d1th7a1 |
Domain d1th7m_: 1th7 M: [119276] automated match to d1th7a1 |
Domain d1th7n_: 1th7 N: [119277] automated match to d1th7a1 |
Timeline for Protein Archaeal homoheptameric Sm protein from b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP: