PDB entry 1i8f
View 1i8f on RCSB PDB site
Description: the crystal structure of a heptameric archaeal sm protein: implications for the eukaryotic snrnp core
Class: structural genomics
Keywords: beta barrel-like SmAP monomers form 35-stranded beta-sheet in the heptamer, STRUCTURAL GENOMICS
Deposited on
2001-03-14, released
2001-05-16
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: 0.235
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8fa_ - Chain 'B':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8fb_ - Chain 'C':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8fc_ - Chain 'D':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8fd_ - Chain 'E':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8fe_ - Chain 'F':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8ff_ - Chain 'G':
Compound: putative snrnp sm-like protein
Species: Pyrobaculum aerophilum [TaxId:13773]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d1i8fg_ - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>1i8fA (A:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fA (A:)
atlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvr
genvlfispvp
- Chain 'B':
Sequence, based on SEQRES records: (download)
>1i8fB (B:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fB (B:)
fatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvv
rgenvlfispvp
- Chain 'C':
Sequence, based on SEQRES records: (download)
>1i8fC (C:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fC (C:)
atlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvrgenv
lfispvpg
- Chain 'D':
Sequence, based on SEQRES records: (download)
>1i8fD (D:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fD (D:)
fatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvv
rgenvlfispvpg
- Chain 'E':
Sequence, based on SEQRES records: (download)
>1i8fE (E:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fE (E:)
tlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvrg
envlfispvp
- Chain 'F':
Sequence, based on SEQRES records: (download)
>1i8fF (F:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fF (F:)
iskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrg
tmvvrgenvlfispvpg
- Chain 'G':
Sequence, based on SEQRES records: (download)
>1i8fG (G:)
masdiskcfatlgatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnv
ykrgtmvvrgenvlfispvpg
Sequence, based on observed residues (ATOM records): (download)
>1i8fG (G:)
gatlqdsigkqvlvklrdsheirgilrsfdqhvnllledaeeiidgnvykrgtmvvrgen
vlfispvp