Lineage for Species: Methanococcus jannaschii [TaxId: 2190]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2921858Fold c.120: PIN domain-like [88722] (1 superfamily)
    3 layers, a/b/a; core: parallel beta-sheet of 5 strands, order 32145
  4. 2921859Superfamily c.120.1: PIN domain-like [88723] (4 families) (S)
  5. 2921920Family c.120.1.2: 5' to 3' exonuclease catalytic domain [53045] (4 proteins)
    contains an alpha-helical arch and additional strand 6 antiparallel to the rest; strand order 321456; similarity to the resolvase-like fold
  6. 2921927Protein Flap endonuclease-1 (Fen-1 nuclease) [53052] (5 species)
  7. 2921936Species Methanococcus jannaschii [TaxId:2190] [53053] (2 PDB entries)

PDB entries in Species: Methanococcus jannaschii [TaxId: 2190]:

  1. Domain(s) for 1a76:
    • 2921938Domain d1a76a2: 1a76 A:2-208 [33361]
      Other proteins in same PDB: d1a76a1
      complexed with mn
      missing some secondary structures that made up less than one-third of the common domain
  2. Domain(s) for 1a77:
    • 2921937Domain d1a77a2: 1a77 A:2-208 [33360]
      Other proteins in same PDB: d1a77a1
      complexed with mg
      missing some secondary structures that made up less than one-third of the common domain

More info for Species Methanococcus jannaschii [TaxId:2190] from c.120.1.2 Flap endonuclease-1 (Fen-1 nuclease)

Timeline for Species Methanococcus jannaschii [TaxId:2190] from c.120.1.2 Flap endonuclease-1 (Fen-1 nuclease):