SCOPe 2.08: Domain d8f0ab1: 8f0a B:12-259

Lineage for d8f0ab1 (8f0a B:12-259)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.47: Trypsin-like serine proteases [50493] (1 superfamily)
   barrel, closed; n=6, S=8; greek-key
   duplication: consists of two domains of the same fold

4. Superfamily b.47.1: Trypsin-like serine proteases [50494] (5 families)

5. Family b.47.1.1: Prokaryotic proteases [50495] (16 proteins)

6. Protein Protease Do (DegP, HtrA), catalytic domain [74969] (2 species)

7. Species Escherichia coli [TaxId:562] [74970] (5 PDB entries)

8. Domain d8f0ab1: 8f0a B:12-259 [423440]
   Other proteins in same PDB: d8f0aa2, d8f0ab2, d8f0ac2
   automated match to d3cs0a3

Details for d8f0ab1

PDB Entry: 8f0a, 2.6 Å

PDB Description: client-bound structure of a degp trimer within a 12mer cage

PDB Compounds: (B:) periplasmic serine endoprotease degp

SCOPe Domain Sequences for d8f0ab1:

Sequence, based on SEQRES records:

>d8f0ab1 b.47.1.1 (B:12-259) Protease Do (DegP, HtrA), catalytic domain {Escherichia coli [TaxId: 562]}
mpslapmlekvmpsvvsinvegsttvntprmprnfqqffgddspfcqegspfqsspfcqg
gqggngggqqqkfmalgsgviidadkgyvvtnnhvvdnatvikvqlsdgrkfdakmvgkd
prsdialiqiqnpknltaikmadsdalrvgdytvaignpfglgetvtsgivsalgrsgln
aenyenfiqtdaainrgnaggalvnlngeligintailapdggnigigfaipsnmvknlt
sqmveygq

Sequence, based on observed residues (ATOM records):

>d8f0ab1 b.47.1.1 (B:12-259) Protease Do (DegP, HtrA), catalytic domain {Escherichia coli [TaxId: 562]}
mpslapmlekvmpsvvsinvegstqkfmalgsgviidadkgyvvtnnhvvdnatvikvql
sdgrkfdakmvgkdprsdialiqiqnpknltaikmadsdalrvgdytvaignpfglgetv
tsgivsalgrsglnaenyenfiqtdaainrgnaggalvnlngeligintailapdggnig
igfaipsnmvknltsqmveygq

Timeline for d8f0ab1:

• d8f0ab1 appears in periodic updates to SCOPe 2.08 starting on 2023-01-06