SCOPe 2.08: Domain d1ytba1: 1ytb A:61-155

Lineage for d1ytba1 (1ytb A:61-155)

1. Root: SCOPe 2.08

2. Class d: Alpha and beta proteins (a+b) [53931] (396 folds)

3. Fold d.129: TBP-like [55944] (11 superfamilies)
   beta-alpha-beta(4)-alpha

4. Superfamily d.129.1: TATA-box binding protein-like [55945] (3 families)

5. Family d.129.1.1: TATA-box binding protein (TBP), C-terminal domain [55946] (1 protein)
   duplication: consists of two clear structural repeats
   automatically mapped to Pfam PF00352

6. Protein TATA-box binding protein (TBP), C-terminal domain [55947] (5 species)
   structure of the N-terminal domain is not known yet

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [55950] (7 PDB entries)

8. Domain d1ytba1: 1ytb A:61-155 [41276]
   complexed with DNA containing TATA-box
   protein/DNA complex

Details for d1ytba1

PDB Entry: 1ytb, 1.8 Å

PDB Description: crystal structure of a yeast tbp/tata-box complex

PDB Compounds: (A:) protein (tata binding protein (tbp))

SCOPe Domain Sequences for d1ytba1:

Sequence; same for both SEQRES and ATOM records:

>d1ytba1 d.129.1.1 (A:61-155) TATA-box binding protein (TBP), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
sgivptlqnivatvtlgcrldlktvalharnaeynpkrfaavimrirepkttalifasgk
mvvtgakseddsklasrkyariiqkigfaakftdf

Timeline for d1ytba1:

• d1ytba1 first appeared (with stable ids) in SCOP 1.55
  
• d1ytba1 appears in SCOPe 2.07