SCOPe 2.01: Domain d2vp3a_: 2vp3 A:

Lineage for d2vp3a_ (2vp3 A:)

1. Root: SCOPe 2.01

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.66: S-adenosyl-L-methionine-dependent methyltransferases [53334] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 7 strands, order 3214576; strand 7 is antiparallel to the rest

4. Superfamily c.66.1: S-adenosyl-L-methionine-dependent methyltransferases [53335] (58 families)

5. Family c.66.1.25: mRNA cap methylase [88785] (3 proteins)

6. Protein Polymerase regulatory subunit VP39 [53361] (1 species)

7. Species Vaccinia virus [TaxId:10245] [53362] (18 PDB entries)

8. Domain d2vp3a_: 2vp3 A: [34211]
   protein/RNA complex; complexed with m7g, sah; mutant

Details for d2vp3a_

PDB Entry: 2vp3, 1.95 Å

PDB Description: dc26 mutant of vaccinia virus protein vp39 in complex with s-adenosylhomocysteine and m7g(5')pppg

PDB Compounds: (A:) vp39

SCOPe Domain Sequences for d2vp3a_:

Sequence, based on SEQRES records:

>d2vp3a_ c.66.1.25 (A:) Polymerase regulatory subunit VP39 {Vaccinia virus [TaxId: 10245]}
mdvvsldkpfmyfeeidneldyepesanevakklpyqgqlklllgelfflsklqrhgild
gatvvyigsapgthirylrdhfynlgviikwmlidgrhhdpilnglrdvtlvtrfvdeey
lrsikkqlhpskiilisdvrskrggnepstadllsnyalqnvmisilnpvasslkwrcpf
pdqwikdfyiphgnkmlqpfapsysaemrllsiytgenmrltrvtksdavnyekkmyyln
kivrnkvvvnfdypnqeydyfhmyfmlrtvycnktfpttkakvlflqqsifrflnip

Sequence, based on observed residues (ATOM records):

>d2vp3a_ c.66.1.25 (A:) Polymerase regulatory subunit VP39 {Vaccinia virus [TaxId: 10245]}
mdvvsldkpfmyfeeidneldyepesanevakklpyqgqlklllgelfflsklqrhgild
gatvvyigsapgthirylrdhfynlgviikwmlidgrhhdpilnglrdvtlvtrfvdeey
lrsikkqlhpskiilisdvrspstadllsnyalqnvmisilnpvasslkwrcpfpdqwik
dfyiphgnkmlqpfapsysaemrllsiytgenmrltrvtksdavnyekkmyylnkivrnk
vvvnfdypnqeydyfhmyfmlrtvycnktfpttkakvlflqqsifrflnip

Timeline for d2vp3a_:

• d2vp3a_ first appeared (with stable ids) in SCOP 1.55, called d2vp3__
  
• d2vp3a_ appears in SCOP 1.75
  
• d2vp3a_ appears in SCOPe 2.02
  
• d2vp3a_ appears in the current release, SCOPe 2.08