SCOPe 2.06: Domain d5k4gb_: 5k4g B:

Lineage for d5k4gb_ (5k4g B:)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
   consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
   Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
   Domain 2 has parallel beta-sheet of 4 strands, order 1234

4. Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families)

5. Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
   automatically mapped to Pfam PF00710

6. Protein automated matches [190446] (8 species)
   not a true protein

7. Species Wolinella succinogenes [TaxId:273121] [332350] (1 PDB entry)

8. Domain d5k4gb_: 5k4g B: [332351]
   Other proteins in same PDB: d5k4ga_, d5k4gc_
   automated match to d1wsaa_
   complexed with asp

Details for d5k4gb_

PDB Entry: 5k4g, 1.6 Å

PDB Description: wolinella succinogenes l-asparaginase s121 + l-aspartic acid, open conformation

PDB Compounds: (B:) L-asparaginase

SCOPe Domain Sequences for d5k4gb_:

Sequence; same for both SEQRES and ATOM records:

>d5k4gb_ c.88.1.1 (B:) automated matches {Wolinella succinogenes [TaxId: 273121]}
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrsg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty

Timeline for d5k4gb_:

• d5k4gb_ is new in SCOPe 2.06-stable
  
• d5k4gb_ appears in SCOPe 2.07
  
• d5k4gb_ appears in the current release, SCOPe 2.08