SCOPe 2.06: Domain d5x6na_: 5x6n A:

Lineage for d5x6na_ (5x6n A:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.264: Duffy binding domain-like [140923] (1 superfamily)
   consist of two subdomains, each containing a three-helical bundle

4. Superfamily a.264.1: Duffy binding domain-like [140924] (2 families)
   automatically mapped to Pfam PF05424

5. Family a.264.1.1: Duffy binding domain [140925] (3 proteins)
   Pfam PF05424

6. Protein automated matches [191262] (2 species)
   not a true protein

7. Species Plasmodium knowlesi [TaxId:5850] [330956] (1 PDB entry)

8. Domain d5x6na_: 5x6n A: [330957]
   automated match to d2c6ja1
   complexed with bog, so4

Details for d5x6na_

PDB Entry: 5x6n, 3 Å

PDB Description: structure of p. knowlesi dbl domain capable of binding human duffy antigen

PDB Compounds: (A:) Duffy binding protein

SCOPe Domain Sequences for d5x6na_:

Sequence, based on SEQRES records:

>d5x6na_ a.264.1.1 (A:) automated matches {Plasmodium knowlesi [TaxId: 5850]}
kcndkrkrgerdwdcpaekdicisdrryqlcmkeltnlvnntrthshnditflklnlkrk
lmydaavegdlllkknnyqynkefckdirwglgdfgdiimgtnmegigysqvvennlrsi
fgtdekakqdrkqwwneskehiwrammfslrsrlkekfvwickkdvtlkvepqiyrwire
wgrdymselpkeqgklnekcasklyynnmaicmlplchdacksydqwitrkkkqwdvlst
kfssvkktqkigteniataydilkqelngfkeatfeneinkrdnlynhlcpcvv

Sequence, based on observed residues (ATOM records):

>d5x6na_ a.264.1.1 (A:) automated matches {Plasmodium knowlesi [TaxId: 5850]}
kcndkrkrgerdwdcpaekdicisdrryqlcmkeltnlitflklnlkrklmydaavegdl
llkknnyqynkefckdirwglgdfgdiimgtnmegvennlrsifgtdekakqdrkqwwne
skehiwrammfslrsrlkekfvwickkdvtlkvepqiyrwirewgrdymselpkeqgkln
ekcasklyynnmaicmlplchdacksydqwitrkkkqwdvlstkfssvkktqkiniatay
dilkqelngfkeatfeneinkrdnlynhlcpcvv

Timeline for d5x6na_:

• d5x6na_ is new in SCOPe 2.06-stable
  
• d5x6na_ appears in SCOPe 2.07
  
• d5x6na_ appears in the current release, SCOPe 2.08