SCOPe 2.06: Domain d5tnbd_: 5tnb D:

Lineage for d5tnbd_ (5tnb D:)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein automated matches [190059] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187214] (173 PDB entries)

8. Domain d5tnbd_: 5tnb D: [329842]
   automated match to d3q95b_
   complexed with 7eb

Details for d5tnbd_

PDB Entry: 5tnb, 2.08 Å

PDB Description: crystal structure of the er-alpha ligand-binding domain (l372s,l536s) in complex with the obhs-bsc, 4-bromophenyl (1r,2r,4s)-6-(4-(2- (dimethylamino)ethoxy)phenyl)-5-(4-hydroxyphenyl)-7- oxabicyclo[2.2.1]hept-5-ene-2-sulfonate

PDB Compounds: (D:) Estrogen receptor

SCOPe Domain Sequences for d5tnbd_:

Sequence, based on SEQRES records:

>d5tnbd_ a.123.1.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
slalsltadqmvsalldaeppilyseydptrpfseasmmglltnladrelvhminwakrv
pgfvdltshdqvhllecawleilmiglvwrsmehpgkllfapnllldrnqgkcvegmvei
fdmllatssrfrmmnlqgeefvclksiillnsgvytflsstlksleekdhihrvldkitd
tlihlmakagltlqqqhqrlaqlllilshirhmsnkgmehlysmkcknvvpsydllleml
da

Sequence, based on observed residues (ATOM records):

>d5tnbd_ a.123.1.1 (D:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
slalsltadqmvsalldaeppilyseydptrsmmglltnladrelvhminwakrvpgfvd
ltshdqvhllecawleilmiglvwrsmehpgkllfapnllldrnqgkgmveifdmllats
srfrmmnlqgeefvclksiillnsgvytfsstlksleekdhihrvldkitdtlihlmaka
gltlqqqhqrlaqlllilshirhmsnkgmehlysvpsydlllemlda

Timeline for d5tnbd_:

• d5tnbd_ is new in SCOPe 2.06-stable
  
• d5tnbd_ appears in SCOPe 2.07
  
• d5tnbd_ appears in the current release, SCOPe 2.08