SCOPe 2.07: Domain d5k3gd1: 5k3g D:2-280

Lineage for d5k3gd1 (5k3g D:2-280)

1. Root: SCOPe 2.07

2. Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)

3. Fold e.6: Acyl-CoA dehydrogenase NM domain-like [56644] (1 superfamily)
   2 domains: (1) all-alpha: 5 helices; (2) contains an open beta-sheet barrel: n*=5, S*=8; complex topology

4. Superfamily e.6.1: Acyl-CoA dehydrogenase NM domain-like [56645] (3 families)
   flavoprotein: binds FAD; constituent families differ in the numbers of C-terminal domains (four-helical bundles)

5. Family e.6.1.0: automated matches [227203] (1 protein)
   not a true family

6. Protein automated matches [226934] (29 species)
   not a true protein

7. Species Nematode (Caenorhabditis elegans) [TaxId:6239] [321813] (4 PDB entries)

8. Domain d5k3gd1: 5k3g D:2-280 [321814]
   Other proteins in same PDB: d5k3ga2, d5k3ga3, d5k3gb2, d5k3gb3, d5k3gc2, d5k3gc3, d5k3gd2, d5k3gd3
   automated match to d2ddha3

Details for d5k3gd1

PDB Entry: 5k3g, 2.86 Å

PDB Description: crystals structure of acyl-coa oxidase-1 in caenorhabditis elegans, apo form-i

PDB Compounds: (D:) Acyl-coenzyme A oxidase

SCOPe Domain Sequences for d5k3gd1:

Sequence; same for both SEQRES and ATOM records:

>d5k3gd1 e.6.1.0 (D:2-280) automated matches {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
vhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhdsm
plpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmfi
palnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlhtp
kitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdigp
kmaynivdngflgfnnyriprtnllmrhtkveadgtyik

Timeline for d5k3gd1:

• d5k3gd1 first appeared in SCOPe 2.06
  
• d5k3gd1 appears in the current release, SCOPe 2.08