PDB entry 5k3g

View 5k3g on RCSB PDB site
Description: Crystals structure of Acyl-CoA oxidase-1 in Caenorhabditis elegans, Apo form-I
Class: oxidoreductase
Keywords: dauer pheromone, ascarosides, b-oxidation, ATP, OXIDOREDUCTASE
Deposited on 2016-05-19, released 2016-08-24
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-09-27, with a file datestamp of 2017-09-22.
Experiment type: XRAY
Resolution: 2.86 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Acyl-coenzyme A oxidase
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: acox-1, CELE_F08A8.1, F08A8.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k3ga1, d5k3ga2, d5k3ga3
  • Chain 'B':
    Compound: Acyl-coenzyme A oxidase
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: acox-1, CELE_F08A8.1, F08A8.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k3gb1, d5k3gb2, d5k3gb3
  • Chain 'C':
    Compound: Acyl-coenzyme A oxidase
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: acox-1, CELE_F08A8.1, F08A8.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k3gc1, d5k3gc2, d5k3gc3
  • Chain 'D':
    Compound: Acyl-coenzyme A oxidase
    Species: Caenorhabditis elegans [TaxId:6239]
    Gene: acox-1, CELE_F08A8.1, F08A8.1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d5k3gd1, d5k3gd2, d5k3gd3

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5k3gA (A:)
mvhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhds
mplpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmf
ipalnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlht
pkitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdig
pkmaynivdngflgfnnyriprtnllmrhtkveadgtyikpphakinysamvhvrsymlt
gqaimlsyalniatrysavrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagae
tvklyervlkemksgnvslmadlhaltsglksvvthqtgegieqarmacgghgysmasyi
seiygvaiggctyegenmvmllqlarylvksaalvksgkasqlgplvaylgarseptsli
drvpnggiteyiktfqhiakrqtlkaankffglmengekreiawnkssvelnrasrlhtr
lfiveafarrvneigditikealsdllhlhvnyelldvatyaledgfmsstqldyvrdql
yfylqkirpnavslldswefsdrelrsvlgrrdghvyenlfkwakesplnktdvlpsvdt
ylkpmmekarqsklhhhhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5k3gA (A:)
vhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhdsm
plpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmfi
palnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlhtp
kitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdigp
kmaynivdngflgfnnyriprtnllmrhtkveadgtyiymltgqaimlsyalniatrysa
vrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagaetvklyerdlhaltsglks
vvthqtgegieqarmacgghgysmasyiseiygvaiggvmllqlarylvksaalvksgka
sqlgplvaylgarseptslidrvpnggiteyiktfqhiakrqtlkaankffglmengekr
eiawnkssvelnrasrlhtrlfiveafarrvneigditikealsdllhlhvnyelldvat
yaledgfmsstqldyvrdqlyfylqkirpnavslldswefsdrelrsvlgrrdghvyenl
fkwakesplnktdvlpsvdtylkpmmeka

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5k3gB (B:)
mvhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhds
mplpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmf
ipalnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlht
pkitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdig
pkmaynivdngflgfnnyriprtnllmrhtkveadgtyikpphakinysamvhvrsymlt
gqaimlsyalniatrysavrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagae
tvklyervlkemksgnvslmadlhaltsglksvvthqtgegieqarmacgghgysmasyi
seiygvaiggctyegenmvmllqlarylvksaalvksgkasqlgplvaylgarseptsli
drvpnggiteyiktfqhiakrqtlkaankffglmengekreiawnkssvelnrasrlhtr
lfiveafarrvneigditikealsdllhlhvnyelldvatyaledgfmsstqldyvrdql
yfylqkirpnavslldswefsdrelrsvlgrrdghvyenlfkwakesplnktdvlpsvdt
ylkpmmekarqsklhhhhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5k3gB (B:)
vhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhdsm
plpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmfi
palnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlhtp
kitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdigp
kmaynivdngflgfnnyriprtnllmrhtkveadgtyikymltgqaimlsyalniatrys
avrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagaetvklyervladlhalts
glksvvthqtgegieqarmacgghgysmasyiseiygvaigmvmllqlarylvksaalvk
sgkasqlgplvaylgarseptslidrvpnggiteyiktfqhiakrqtlkaankffglmen
gekreiawnkssvelnrasrlhtrlfiveafarrvneigditikealsdllhlhvnyell
dvatyaledgfmsstqldyvrdqlyfylqkirpnavslldswefsdrelrsvlgrrdghv
yenlfkwakesplnktdvlpsvdtylkpmmeka

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5k3gC (C:)
mvhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhds
mplpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmf
ipalnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlht
pkitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdig
pkmaynivdngflgfnnyriprtnllmrhtkveadgtyikpphakinysamvhvrsymlt
gqaimlsyalniatrysavrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagae
tvklyervlkemksgnvslmadlhaltsglksvvthqtgegieqarmacgghgysmasyi
seiygvaiggctyegenmvmllqlarylvksaalvksgkasqlgplvaylgarseptsli
drvpnggiteyiktfqhiakrqtlkaankffglmengekreiawnkssvelnrasrlhtr
lfiveafarrvneigditikealsdllhlhvnyelldvatyaledgfmsstqldyvrdql
yfylqkirpnavslldswefsdrelrsvlgrrdghvyenlfkwakesplnktdvlpsvdt
ylkpmmekarqsklhhhhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5k3gC (C:)
vhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhdsm
plpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmfi
palnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlhtp
kitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdigp
kmaynivdngflgfnnyriprtnllmrhtkveadgtyikpltgqaimlsyalniatrysa
vrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagaetvklyervllhaltsglk
svvthqtgegieqarmacgghgysmasyiseiygvaigmvmllqlarylvksaalvksgk
asqlgplvaylgarseptslidrvpnggiteyiktfqhiakrqtlkaankffglmengek
reiawnkssvelnrasrlhtrlfiveafarrvneigditikealsdllhlhvnyelldva
tyaledgfmsstqldyvrdqlyfylqkirpnavslldswefsdrelrsvlgrrdghvyen
lfkwakesplnktdvlpsvdtylkpmmeka

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5k3gD (D:)
mvhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhds
mplpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmf
ipalnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlht
pkitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdig
pkmaynivdngflgfnnyriprtnllmrhtkveadgtyikpphakinysamvhvrsymlt
gqaimlsyalniatrysavrrqgqidknepevkvleyqtqqhrlfpfiarayafqfagae
tvklyervlkemksgnvslmadlhaltsglksvvthqtgegieqarmacgghgysmasyi
seiygvaiggctyegenmvmllqlarylvksaalvksgkasqlgplvaylgarseptsli
drvpnggiteyiktfqhiakrqtlkaankffglmengekreiawnkssvelnrasrlhtr
lfiveafarrvneigditikealsdllhlhvnyelldvatyaledgfmsstqldyvrdql
yfylqkirpnavslldswefsdrelrsvlgrrdghvyenlfkwakesplnktdvlpsvdt
ylkpmmekarqsklhhhhhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >5k3gD (D:)
vhlnktiqegdnpdltaerltatfdthamaaqiyggemrarrrreitaklaeipelhdsm
plpymtreekimesarkltvltqrmseiidptdagelyhlnnevlgiegnpmalhgvmfi
palnaqasdeqqakwliralrreiigtyaqtemghgtnlqnlettatydigtqefvlhtp
kitalkwwpgnlgkssnyavvvahmyikgknfgphtfmvplrdekthkplpgitigdigp
kmaynivdngflgfnnyriprtnllmrhtkveadgtyikltgqaimlsyalniatrysav
rrqgqidknepevkvleyqtqqhrlfpfiarayafqfagaetvklyervlhaltsglksv
vthqtgegieqarmacgghgysmasyiseiygvaigmvmllqlarylvksaalvksgkas
qlgplvaylgarseptslidrvpgiteyiktfqhiakrqtlkaankffglmengekreia
wnkssvelnrasrlhtrlfiveafarrvneigditikealsdllhlhvnyelldvatyal
edgfmsstqldyvrdqlyfylqkirpnavslldswefsdrelrsvlgrrdghvyenlfkw
akesplnktdvlpsvdtylkpmmeka