SCOPe 2.04: Domain d3i9ve_: 3i9v E:

Lineage for d3i9ve_ (3i9v E:)

1. Root: SCOPe 2.04

2. Class d: Alpha and beta proteins (a+b) [53931] (380 folds)

3. Fold d.307: Nqo5-like [143242] (1 superfamily)
   core: alpha-beta(2)-alpha-beta(3); 2 layers, a/b; mixed beta-sheet, order 12534, strands 2 and 5 are parallel

4. Superfamily d.307.1: Nqo5-like [143243] (1 family)

5. Family d.307.1.1: Nqo5-like [143244] (2 proteins)
   Globular region is covered by PfamB PB121908 from N-end and then by PfamB PB000646; contains extra C-terminal unstructured region, corresponding to Pfam PF00329

6. Protein automated matches [254685] (1 species)
   not a true protein

7. Species Thermus thermophilus HB8 [TaxId:300852] [255883] (3 PDB entries)

8. Domain d3i9ve_: 3i9v E: [246773]
   Other proteins in same PDB: d3i9v11, d3i9v12, d3i9v13, d3i9v2_, d3i9v31, d3i9v32, d3i9v33, d3i9v34, d3i9v4_, d3i9v6_, d3i9v7_, d3i9v9_, d3i9va1, d3i9va2, d3i9va3, d3i9vb_, d3i9vc1, d3i9vc2, d3i9vc3, d3i9vc4, d3i9vd_, d3i9vf_, d3i9vg_, d3i9vh_
   automated match to d2fug51
   complexed with ca, fes, fmn, mn, sf4

Details for d3i9ve_

PDB Entry: 3i9v, 3.1 Å

PDB Description: Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus, oxidized, 2 mol/ASU

PDB Compounds: (E:) NADH-quinone oxidoreductase subunit 5

SCOPe Domain Sequences for d3i9ve_:

Sequence; same for both SEQRES and ATOM records:

>d3i9ve_ d.307.1.1 (E:) automated matches {Thermus thermophilus HB8 [TaxId: 300852]}
mrlervleearakgypiednglgnlwvvlprerfkeemahykamgfnfladivgldylty
pdprperfavvyelvslpgwkdgdgsrffvrvyvpeedprlptvtdlwgsanflerevyd
lfgivfeghpdlrkiltpedleghplrkdyplgetptlfregryiipaefraaltgkdpg
ltfykggsrkgyrslw

Timeline for d3i9ve_:

• d3i9ve_ is new in SCOPe 2.04-stable
  
• d3i9ve_ appears in SCOPe 2.05
  
• d3i9ve_ appears in the current release, SCOPe 2.08