SCOPe 2.08: Domain d2omja1: 2omj A:5-89

Lineage for d2omja1 (2omj A:5-89)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.36: PDZ domain-like [50155] (1 superfamily)
   contains barrel, partly opened; n*=4, S*=8; meander; capped by alpha-helix

4. Superfamily b.36.1: PDZ domain-like [50156] (7 families)
   peptide-binding domain

5. Family b.36.1.0: automated matches [191362] (1 protein)
   not a true family

6. Protein automated matches [190436] (9 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187333] (104 PDB entries)

8. Domain d2omja1: 2omj A:5-89 [243353]
   Other proteins in same PDB: d2omja2
   automated match to d2w4fa_

Details for d2omja1

PDB Entry: 2omj

PDB Description: solution structure of larg pdz domain

PDB Compounds: (A:) Rho guanine nucleotide exchange factor 12

SCOPe Domain Sequences for d2omja1:

Sequence; same for both SEQRES and ATOM records:

>d2omja1 b.36.1.0 (A:5-89) automated matches {Human (Homo sapiens) [TaxId: 9606]}
glvqrcviiqkddngfgltvsgdnpvfvqsvkedgaamragvqtgdriikvngtlvthsn
hlevvkliksgsyvaltvqgrppgs

Timeline for d2omja1:

• d2omja1 first appeared in SCOPe 2.04, called d2omja_
  
• d2omja1 appears in SCOPe 2.07