Lineage for d4a1ka2 (4a1k A:49-164)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2825385Fold b.160: L,D-transpeptidase catalytic domain-like [141522] (1 superfamily)
    barrel, closed; n=8, S=10; one overside connection
  4. 2825386Superfamily b.160.1: L,D-transpeptidase catalytic domain-like [141523] (1 family) (S)
    automatically mapped to Pfam PF03734
  5. 2825387Family b.160.1.1: L,D-transpeptidase catalytic domain-like [141524] (3 proteins)
    Pfam PF03734; ErfK/YbiS/YcfS/YnhG
  6. 2825409Protein automated matches [234004] (6 species)
    not a true protein
  7. 2825410Species Bacillus subtilis [TaxId:1423] [234005] (3 PDB entries)
  8. 2825419Domain d4a1ka2: 4a1k A:49-164 [234024]
    Other proteins in same PDB: d4a1ka1, d4a1ka3
    automated match to d1y7ma1
    complexed with so4

Details for d4a1ka2

PDB Entry: 4a1k (more details), 1.75 Å

PDB Description: ykud l,d-transpeptidase
PDB Compounds: (A:) putative l, d-transpeptidase ykud

SCOPe Domain Sequences for d4a1ka2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4a1ka2 b.160.1.1 (A:49-164) automated matches {Bacillus subtilis [TaxId: 1423]}
pdpytipyhiavsigaktltlslnnrvmktypiavgkiltqtptgefyiinrqrnpggpf
gaywlslsaahygihgtnnpasigkavskgcirmhnkdvielasivpngtrvtinr

SCOPe Domain Coordinates for d4a1ka2:

Click to download the PDB-style file with coordinates for d4a1ka2.
(The format of our PDB-style files is described here.)

Timeline for d4a1ka2: