Lineage for Species: Human immunodeficiency virus 1 [TaxId: 11676]

  1. Root: SCOPe 2.05
  2. 1715731Class a: All alpha proteins [46456] (286 folds)
  3. 1731061Fold a.28: Acyl carrier protein-like [47335] (3 superfamilies)
    4 helices, bundle; helix 3 is shorter than others; up-and-down
  4. 1731303Superfamily a.28.3: Retrovirus capsid dimerization domain-like [47353] (3 families) (S)
  5. 1731376Family a.28.3.0: automated matches [191629] (1 protein)
    not a true family
  6. 1731377Protein automated matches [191156] (8 species)
    not a true protein
  7. 1731386Species Human immunodeficiency virus 1 [TaxId:11676] [233043] (3 PDB entries)

PDB entries in Species: Human immunodeficiency virus 1 [TaxId: 11676]:

  1. Domain(s) for 2lf4:
  2. Domain(s) for 3nte:
    1. 1731387Domain d3ntea2: 3nte A:148-221 [233046]
      Other proteins in same PDB: d3ntea1, d3nteb1
      automated match to d1e6jp1
      complexed with fe, i3m, iod, na
    2. 1731388Domain d3nteb2: 3nte B:148-221 [233044]
      Other proteins in same PDB: d3ntea1, d3nteb1
      automated match to d1e6jp1
      complexed with fe, i3m, iod, na
  3. Domain(s) for 3p05:
    1. 1731389Domain d3p05a2: 3p05 A:148-219 [239594]
      Other proteins in same PDB: d3p05a1, d3p05b1, d3p05c1, d3p05d1, d3p05e1
      automated match to d3p05b2
      complexed with iod
    2. 1731390Domain d3p05b2: 3p05 B:148-219 [233182]
      Other proteins in same PDB: d3p05a1, d3p05b1, d3p05c1, d3p05d1, d3p05e1
      automated match to d1e6jp1
      complexed with iod
    3. 1731391Domain d3p05c2: 3p05 C:148-219 [233186]
      Other proteins in same PDB: d3p05a1, d3p05b1, d3p05c1, d3p05d1, d3p05e1
      automated match to d1e6jp1
      complexed with iod
    4. 1731392Domain d3p05e2: 3p05 E:148-219 [239596]
      Other proteins in same PDB: d3p05a1, d3p05b1, d3p05c1, d3p05d1, d3p05e1
      automated match to d3p05b2
      complexed with iod

More info for Species Human immunodeficiency virus 1 [TaxId:11676] from a.28.3.0 automated matches

Timeline for Species Human immunodeficiency virus 1 [TaxId:11676] from a.28.3.0 automated matches: