SCOPe 2.04: Domain d3qgva1: 3qgv A:1-361

Lineage for d3qgva1 (3qgv A:1-361)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
   members of the family may contain various insert subdomains
   in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain

6. Protein automated matches [190099] (19 species)
   not a true protein

7. Species Pyrococcus woesei [TaxId:2262] [226292] (1 PDB entry)

8. Domain d3qgva1: 3qgv A:1-361 [215224]
   Other proteins in same PDB: d3qgva2
   automated match to d1mxga2
   complexed with bcd, ca, so4, suc, trs, zn

Details for d3qgva1

PDB Entry: 3qgv, 2.1 Å

PDB Description: crystal structure of a thermostable amylase variant

PDB Compounds: (A:) alpha amylase

SCOPe Domain Sequences for d3qgva1:

Sequence; same for both SEQRES and ATOM records:

>d3qgva1 c.1.8.1 (A:1-361) automated matches {Pyrococcus woesei [TaxId: 2262]}
akyselekggvimqafywdvpsggiwwdtirqkipewydagisaiwippaskgmggaysm
gydpydffdlgeydqkgtvetrfgskqelvnmintahaygmkviadivinhraggdlewn
pfvndytwtdfskvasgkytanyldfhpnelhagdsgtfggypdichdkswdqywlwasq
esyaaylrsigidawrfdyvkgyapwvvkdwlnwwggwavgeywdtnvdavlnwayssga
kvfdfalyykmdeafdnknipalvsalqngqtvvsrdpfkavtfvanhdtdiiwnkypay
afiltyegqptifyrdyeewlnkdklknliwihenlaggstdivyydndelifvrngygd
k

Timeline for d3qgva1:

• d3qgva1 first appeared in SCOPe 2.03
  
• d3qgva1 appears in SCOPe 2.05
  
• d3qgva1 appears in the current release, SCOPe 2.08