SCOPe 2.03: Domain d3lwbb1: 3lwb B:10-150

Lineage for d3lwbb1 (3lwb B:10-150)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
   3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
   possible rudiment form of Rossmann-fold domain

4. Superfamily c.30.1: PreATP-grasp domain [52440] (9 families)
   precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function

5. Family c.30.1.0: automated matches [227183] (1 protein)
   not a true family

6. Protein automated matches [226903] (19 species)
   not a true protein

7. Species Mycobacterium tuberculosis [TaxId:1773] [225851] (1 PDB entry)

8. Domain d3lwbb1: 3lwb B:10-150 [213079]
   Other proteins in same PDB: d3lwba2, d3lwbb2
   automated match to d1ehib1
   complexed with no3

Details for d3lwbb1

PDB Entry: 3lwb, 2.1 Å

PDB Description: crystal structure of apo d-alanine:d-alanine ligase (ddl) from mycobacterium tuberculosis

PDB Compounds: (B:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d3lwbb1:

Sequence, based on SEQRES records:

>d3lwbb1 c.30.1.0 (B:10-150) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
rvrvavvfggrsnehaiscvsagsilrnldsrrfdviavgitpagswvltdanpdaltit
nrelpqvksgsgtelalpadprrggqlvslppgagevlesvdvvfpvlhgpygedgtiqg
llelagvpyvgagvlasavgm

Sequence, based on observed residues (ATOM records):

>d3lwbb1 c.30.1.0 (B:10-150) automated matches {Mycobacterium tuberculosis [TaxId: 1773]}
rvrvavvfhaiscvsagsilrnldsrrfdviavgitpvlesvdvvfpvlhtiqgllelag
vpyvgagvlasavgm

Timeline for d3lwbb1:

• d3lwbb1 is new in SCOPe 2.03-stable
  
• d3lwbb1 appears in SCOPe 2.04
  
• d3lwbb1 appears in the current release, SCOPe 2.08