Lineage for Protein: automated matches

  1. Root: SCOPe 2.02
  2. 1190016Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1216883Fold d.118: N-acetylmuramoyl-L-alanine amidase-like [55845] (1 superfamily)
    contains mixed beta-sheet
  4. 1216884Superfamily d.118.1: N-acetylmuramoyl-L-alanine amidase-like [55846] (2 families) (S)
  5. 1216885Family d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like [55847] (11 proteins)
    Family 2 zinc amidase;
  6. 1216946Protein automated matches [190549] (3 species)
    not a true protein

Species:

  1. 1216947Camel (Camelus dromedarius) [TaxId:9838] [188016] (23 PDB entries)
    1. Domains for 2r90:
      1. 1217029Domain d2r90a_: 2r90 A: [168009]
        automated match to d1ycka1
      2. 1217030Domain d2r90b_: 2r90 B: [168010]
        automated match to d1ycka1
      3. 1217031Domain d2r90c_: 2r90 C: [168011]
        automated match to d1ycka1
      4. 1217032Domain d2r90d_: 2r90 D: [168012]
        automated match to d1ycka1
    2. Domains for 3c2x:
      1. 1216956Domain d3c2xa_: 3c2x A: [173000]
        automated match to d1ycka1
        complexed with gol, so4, tla
      2. 1216957Domain d3c2xb_: 3c2x B: [173001]
        automated match to d1ycka1
        complexed with gol, so4, tla
      3. 1216958Domain d3c2xc_: 3c2x C: [173002]
        automated match to d1ycka1
        complexed with gol, so4, tla
      4. 1216959Domain d3c2xd_: 3c2x D: [173003]
        automated match to d1ycka1
        complexed with gol, so4, tla
    3. Domains for 3cg9:
      1. 1217025Domain d3cg9a_: 3cg9 A: [173220]
        automated match to d1ycka1
        complexed with ram, tla
      2. 1217026Domain d3cg9b_: 3cg9 B: [173221]
        automated match to d1ycka1
        complexed with ram, tla
      3. 1217027Domain d3cg9c_: 3cg9 C: [173222]
        automated match to d1ycka1
        complexed with ram, tla
      4. 1217028Domain d3cg9d_: 3cg9 D: [173223]
        automated match to d1ycka1
        complexed with ram, tla
    4. Domains for 3ng4:
      1. 1216948Domain d3ng4a_: 3ng4 A: [182248]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      2. 1216949Domain d3ng4b_: 3ng4 B: [182249]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      3. 1216950Domain d3ng4c_: 3ng4 C: [182250]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
      4. 1216951Domain d3ng4d_: 3ng4 D: [182251]
        automated match to d1ycka1
        complexed with gol, mal, nag, srt
    5. Domains for 3nkw:
      1. 1216996Domain d3nkwa_: 3nkw A: [182347]
        automated match to d1ycka1
        complexed with nag, tla
      2. 1216997Domain d3nkwb_: 3nkw B: [182348]
        automated match to d1ycka1
        complexed with nag, tla
      3. 1216998Domain d3nkwc_: 3nkw C: [182349]
        automated match to d1ycka1
        complexed with nag, tla
      4. 1216999Domain d3nkwd_: 3nkw D: [182350]
        automated match to d1ycka1
        complexed with nag, tla
    6. Domains for 3nno:
      1. 1217016Domain d3nnoa_: 3nno A: [182419]
        automated match to d1ycka1
        complexed with ram, tla
      2. 1217017Domain d3nnob_: 3nno B: [182420]
        automated match to d1ycka1
        complexed with ram, tla
      3. 1217018Domain d3nnoc_: 3nno C: [182421]
        automated match to d1ycka1
        complexed with ram, tla
      4. 1217019Domain d3nnod_: 3nno D: [182422]
        automated match to d1ycka1
        complexed with ram, tla
    7. Domains for 3nw3:
      1. 1217000Domain d3nw3a_: 3nw3 A: [182585]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      2. 1217001Domain d3nw3b_: 3nw3 B: [182586]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      3. 1217002Domain d3nw3c_: 3nw3 C: [182587]
        automated match to d1ycka1
        complexed with gol, mu2, tla
      4. 1217003Domain d3nw3d_: 3nw3 D: [182588]
        automated match to d1ycka1
        complexed with gol, mu2, tla
    8. Domains for 3o4k:
      1. 1216960Domain d3o4ka_: 3o4k A: [182785]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      2. 1216961Domain d3o4kb_: 3o4k B: [182786]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      3. 1216962Domain d3o4kc_: 3o4k C: [182787]
        automated match to d1ycka1
        complexed with gol, ltc, tla
      4. 1216963Domain d3o4kd_: 3o4k D: [182788]
        automated match to d1ycka1
        complexed with gol, ltc, tla
    9. Domains for 3ogx:
      1. 1217020Domain d3ogxa_: 3ogx A: [183023]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      2. 1217021Domain d3ogxb_: 3ogx B: [183024]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      3. 1217022Domain d3ogxc_: 3ogx C: [183025]
        automated match to d1ycka1
        complexed with gol, h1s, tla
      4. 1217023Domain d3ogxd_: 3ogx D: [183026]
        automated match to d1ycka1
        complexed with gol, h1s, tla
    10. Domains for 3olk:
      1. 1217012Domain d3olka_: 3olk A: [183136]
        automated match to d1ycka1
        complexed with amu, gol, tla
      2. 1217013Domain d3olkb_: 3olk B: [183137]
        automated match to d1ycka1
        complexed with amu, gol, tla
      3. 1217014Domain d3olkc_: 3olk C: [183138]
        automated match to d1ycka1
        complexed with amu, gol, tla
      4. 1217015Domain d3olkd_: 3olk D: [183139]
        automated match to d1ycka1
        complexed with amu, gol, tla
    11. Domains for 3qs0:
      1. 1216992Domain d3qs0a_: 3qs0 A: [184601]
        automated match to d1ycka1
        complexed with gol, nag, tla
      2. 1216993Domain d3qs0b_: 3qs0 B: [184602]
        automated match to d1ycka1
        complexed with gol, nag, tla
      3. 1216994Domain d3qs0c_: 3qs0 C: [184603]
        automated match to d1ycka1
        complexed with gol, nag, tla
      4. 1216995Domain d3qs0d_: 3qs0 D: [184604]
        automated match to d1ycka1
        complexed with gol, nag, tla
    12. Domains for 3qv4:
      1. 1217008Domain d3qv4a_: 3qv4 A: [184638]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      2. 1217009Domain d3qv4b_: 3qv4 B: [184639]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      3. 1217010Domain d3qv4c_: 3qv4 C: [184640]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
      4. 1217011Domain d3qv4d_: 3qv4 D: [184641]
        automated match to d1ycka1
        complexed with ala, cto, dgl, edo, gol, peg, srt
    13. Domains for 3rt4:
      1. 1216952Domain d3rt4a_: 3rt4 A: [185150]
        automated match to d1ycka1
        complexed with lp5, tla
      2. 1216953Domain d3rt4b_: 3rt4 B: [185151]
        automated match to d1ycka1
        complexed with lp5, tla
      3. 1216954Domain d3rt4c_: 3rt4 C: [185152]
        automated match to d1ycka1
        complexed with lp5, tla
      4. 1216955Domain d3rt4d_: 3rt4 D: [185153]
        automated match to d1ycka1
        complexed with lp5, tla
    14. Domains for 3t2v:
      1. 1216988Domain d3t2va_: 3t2v A: [192984]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      2. 1216989Domain d3t2vb_: 3t2v B: [192985]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      3. 1216990Domain d3t2vc_: 3t2v C: [192986]
        automated match to d3ng4a_
        complexed with gol, kkj, tla
      4. 1216991Domain d3t2vd_: 3t2v D: [192107]
        automated match to d2r90a_
        complexed with gol, kkj, tla
    15. Domain for 3t39:
    16. Domains for 3uil:
      1. 1216976Domain d3uila_: 3uil A: [192170]
        automated match to d2r90a_
        complexed with dao, gol
      2. 1216977Domain d3uilb_: 3uil B: [192171]
        automated match to d2r90a_
        complexed with dao, gol
      3. 1216978Domain d3uilc_: 3uil C: [192172]
        automated match to d2r90a_
        complexed with dao, gol
      4. 1216979Domain d3uild_: 3uil D: [192173]
        automated match to d2r90a_
        complexed with dao, gol
    17. Domains for 3uml:
      1. 1216964Domain d3umla_: 3uml A: [186340]
        automated match to d1ycka1
        complexed with gol, isj
      2. 1216965Domain d3umlb_: 3uml B: [186341]
        automated match to d1ycka1
        complexed with gol, isj
      3. 1216966Domain d3umlc_: 3uml C: [186342]
        automated match to d1ycka1
        complexed with gol, isj
      4. 1216967Domain d3umld_: 3uml D: [186343]
        automated match to d1ycka1
        complexed with gol, isj
    18. Domains for 3umq:
      1. 1216972Domain d3umqa_: 3umq A: [192174]
        automated match to d2r90a_
        complexed with bua, gol
      2. 1216973Domain d3umqb_: 3umq B: [192175]
        automated match to d2r90a_
        complexed with bua, gol
      3. 1216974Domain d3umqc_: 3umq C: [192176]
        automated match to d2r90a_
        complexed with bua, gol
      4. 1216975Domain d3umqd_: 3umq D: [192177]
        automated match to d2r90a_
        complexed with bua, gol
    19. Domains for 3usx:
      1. 1216980Domain d3usxa_: 3usx A: [186399]
        automated match to d1ycka1
        complexed with gol, myr
      2. 1216981Domain d3usxb_: 3usx B: [186400]
        automated match to d1ycka1
        complexed with gol, myr
      3. 1216982Domain d3usxc_: 3usx C: [186401]
        automated match to d1ycka1
        complexed with gol, myr
      4. 1216983Domain d3usxd_: 3usx D: [186402]
        automated match to d1ycka1
        complexed with gol, myr
    20. Domains for 4ebs:
      1. 1217004Domain d4ebsa_: 4ebs A: [192369]
        automated match to d2r90a_
        complexed with amu, gol, tla
      2. 1217005Domain d4ebsb_: 4ebs B: [192370]
        automated match to d2r90a_
        complexed with amu, gol, tla
      3. 1217006Domain d4ebsc_: 4ebs C: [192371]
        automated match to d2r90a_
        complexed with amu, gol, tla
      4. 1217007Domain d4ebsd_: 4ebs D: [192372]
        automated match to d2r90a_
        complexed with amu, gol, tla
    21. Domains for 4ebt:
      1. 1216984Domain d4ebta_: 4ebt A: [192373]
        automated match to d2r90a_
        complexed with nag, tla
      2. 1216985Domain d4ebtb_: 4ebt B: [192374]
        automated match to d2r90a_
        complexed with nag, tla
      3. 1216986Domain d4ebtc_: 4ebt C: [192375]
        automated match to d2r90a_
        complexed with nag, tla
      4. 1216987Domain d4ebtd_: 4ebt D: [192376]
        automated match to d2r90a_
        complexed with nag, tla
    22. Domains for 4fnn:
      1. 1216968Domain d4fnna_: 4fnn A: [192437]
        automated match to d2r90a_
        complexed with ste
      2. 1216969Domain d4fnnb_: 4fnn B: [192438]
        automated match to d2r90a_
        complexed with ste
      3. 1216970Domain d4fnnc_: 4fnn C: [192439]
        automated match to d2r90a_
        complexed with ste
      4. 1216971Domain d4fnnd_: 4fnn D: [192440]
        automated match to d2r90a_
        complexed with ste
    23. Domains for 4gf9:
      1. 1217033Domain d4gf9a_: 4gf9 A: [192488]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      2. 1217034Domain d4gf9b_: 4gf9 B: [192486]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      3. 1217035Domain d4gf9c_: 4gf9 C: [192489]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
      4. 1217036Domain d4gf9d_: 4gf9 D: [192487]
        automated match to d3ng4a_
        complexed with gol, lp5, ste
  2. 1217037Fruit fly (Drosophila melanogaster) [TaxId:7227] [187529] (1 PDB entry)
  3. 1217041Human (Homo sapiens) [TaxId:9606] [187654] (1 PDB entry)

More info for Protein automated matches from d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like

Timeline for Protein automated matches from d.118.1.1: N-acetylmuramoyl-L-alanine amidase-like: