Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2376992Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
    sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
  4. 2377239Superfamily b.2.3: Bacterial adhesins [49401] (7 families) (S)
  5. 2377642Family b.2.3.0: automated matches [191391] (1 protein)
    not a true family
  6. 2377643Protein automated matches [190503] (10 species)
    not a true protein

Species:

  1. 2377644Bacillus cereus [TaxId:226900] [311336] (1 PDB entry)
  2. 2377647Enterococcus faecalis [TaxId:1351] [188324] (1 PDB entry)
  3. 2377649Escherichia coli [TaxId:364106] [349115] (10 PDB entries)
    1. Domains for 6aow:
      1. 2377658Domain d6aowa_: 6aow A: [349116]
        automated match to d4xocb_
        complexed with so4
      2. 2377659Domain d6aowb_: 6aow B: [349119]
        automated match to d4xocb_
        complexed with so4
    2. Domains for 6aox:
      1. 2377665Domain d6aoxa_: 6aox A: [349370]
        automated match to d4xocb_
        complexed with tf0
      2. 2377666Domain d6aoxb_: 6aox B: [349170]
        automated match to d4xocb_
        complexed with tf0
    3. Domains for 6aoy:
      1. 2377661Domain d6aoya_: 6aoy A: [349163]
        automated match to d4xocb_
        complexed with 145, so4
      2. 2377662Domain d6aoyb_: 6aoy B: [349123]
        automated match to d4xocb_
        complexed with 145, so4
    4. Domains for 6arm:
      1. 2377656Domain d6arma_: 6arm A: [349121]
        automated match to d4xocb_
        complexed with 145, so4
      2. 2377657Domain d6armb_: 6arm B: [349148]
        automated match to d4xocb_
        complexed with 145, so4
    5. Domains for 6arn:
      1. 2377653Domain d6arna_: 6arn A: [349117]
        automated match to d4xocb_
        complexed with bqy, so4
      2. 2377654Domain d6arnb_: 6arn B: [349188]
        automated match to d4xocb_
        complexed with bqy, so4
    6. Domains for 6aro:
      1. 2377651Domain d6aroa_: 6aro A: [349132]
        automated match to d4xocb_
        complexed with bs7, so4
      2. 2377652Domain d6arob_: 6aro B: [349178]
        automated match to d4xocb_
        complexed with bs7, so4
    7. Domains for 6as8:
      1. 2377663Domain d6as8a_: 6as8 A: [349199]
        automated match to d4xocb_
        complexed with btg
      2. 2377664Domain d6as8b_: 6as8 B: [349217]
        automated match to d4xocb_
        complexed with btg
    8. Domain for 6map:
    9. Domain for 6maq:
    10. Domain for 6maw:
  4. 2377667Escherichia coli [TaxId:562] [187451] (6 PDB entries)
    1. Domains for 2bcm:
      1. 2377668Domain d2bcma_: 2bcm A: [163041]
        automated match to d1rxla_
      2. 2377669Domain d2bcmb_: 2bcm B: [163042]
        automated match to d1rxla_
      3. 2377670Domain d2bcmc_: 2bcm C: [163043]
        automated match to d1rxla_
    2. Domains for 4or1:
      1. 2377686Domain d4or1a1: 4or1 A:1-143 [268529]
        Other proteins in same PDB: d4or1a2, d4or1b2
        automated match to d4phxc_
        complexed with act, so4
      2. 2377687Domain d4or1b1: 4or1 B:1-143 [300088]
        Other proteins in same PDB: d4or1a2, d4or1b2
        automated match to d4or1a_
        complexed with act, so4
    3. Domains for 4phx:
      1. 2377677Domain d4phxa1: 4phx A:1-120 [263487]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      2. 2377678Domain d4phxb1: 4phx B:1-120 [263488]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      3. 2377679Domain d4phxc1: 4phx C:1-119 [259923]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d2axwb_
      4. 2377680Domain d4phxd1: 4phx D:1-119 [263489]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      5. 2377681Domain d4phxe1: 4phx E:1-123 [263490]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      6. 2377682Domain d4phxf1: 4phx F:1-120 [261547]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d2axwb_
      7. 2377683Domain d4phxg1: 4phx G:1-120 [263491]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
      8. 2377684Domain d4phxh1: 4phx H:1-131 [263492]
        Other proteins in same PDB: d4phxa2, d4phxb2, d4phxc2, d4phxd2, d4phxe2, d4phxf2, d4phxg2, d4phxh2
        automated match to d4phxc_
    4. Domains for 5lne:
      1. 2377675Domain d5lnea_: 5lne A: [323709]
        Other proteins in same PDB: d5lneb2
        automated match to d4csta_
        complexed with a2g, gal, ni
      2. 2377676Domain d5lneb1: 5lne B:1-158 [323713]
        Other proteins in same PDB: d5lneb2
        automated match to d4csta_
        complexed with a2g, gal, ni
    5. Domains for 5lng:
      1. 2377671Domain d5lnga_: 5lng A: [323722]
        automated match to d4csta_
        complexed with so4
      2. 2377672Domain d5lngb_: 5lng B: [323736]
        automated match to d4csta_
        complexed with so4
      3. 2377673Domain d5lngc_: 5lng C: [323705]
        automated match to d4csta_
        complexed with so4
      4. 2377674Domain d5lngd_: 5lng D: [323724]
        automated match to d4csta_
        complexed with so4
    6. Domain for 6y7s:
  5. 2377688Escherichia coli [TaxId:83333] [346217] (6 PDB entries)
    1. Domain for 2m5g:
    2. Domains for 3jwn:
      1. 2377691Domain d3jwne_: 3jwn E: [343811]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwnh1, d3jwnh2, d3jwni1, d3jwni2, d3jwnn1, d3jwnn2
        automated match to d5lp9a_
        complexed with gol
      2. 2377692Domain d3jwnf_: 3jwn F: [343812]
        Other proteins in same PDB: d3jwnc1, d3jwnc2, d3jwnh1, d3jwnh2, d3jwni1, d3jwni2, d3jwnn1, d3jwnn2
        automated match to d5lp9a_
        complexed with gol
    3. Domain for 5nkt:
    4. Domain for 6r74:
    5. Domains for 6swh:
      1. 2377693Domain d6swhb_: 6swh B: [391892]
        Other proteins in same PDB: d6swha1, d6swha2, d6swhd1, d6swhd2
        automated match to d5lp9a_
        complexed with edo, peg
      2. 2377694Domain d6swhe_: 6swh E: [391695]
        Other proteins in same PDB: d6swha1, d6swha2, d6swhd1, d6swhd2
        automated match to d5lp9a_
        complexed with edo, peg
    6. Domains for 6y7s:
      1. 2377695Domain d6y7sa_: 6y7s A: [402803]
        automated match to d2m5ga_
      2. 2377696Domain d6y7sb_: 6y7s B: [402765]
        automated match to d2m5ga_
      3. 2377697Domain d6y7sd_: 6y7s D: [402793]
        automated match to d2m5ga_
      4. 2377698Domain d6y7se_: 6y7s E: [402756]
        automated match to d2m5ga_
      5. 2377699Domain d6y7sf_: 6y7s F: [402761]
        automated match to d2m5ga_
  6. 2377701Salmonella paratyphi [TaxId:295319] [363246] (1 PDB entry)
  7. 2377704Shigella flexneri [TaxId:623] [343012] (1 PDB entry)
  8. 2377706Staphylococcus aureus [TaxId:1280] [346218] (1 PDB entry)
  9. 2377708Staphylococcus aureus [TaxId:158878] [336878] (2 PDB entries)
    1. Domain for 5cf3:
    2. Domains for 5wta:
      1. 2377710Domain d5wtaa1: 5wta A:272-418 [336879]
        automated match to d1r17a1
      2. 2377711Domain d5wtaa2: 5wta A:419-586 [336880]
        automated match to d1r17a2
      3. 2377712Domain d5wtab1: 5wta B:272-418 [336923]
        automated match to d1r17a1
      4. 2377713Domain d5wtab2: 5wta B:419-586 [336924]
        automated match to d1r17a2
      5. 2377714Domain d5wtac1: 5wta C:273-418 [336901]
        automated match to d1r17a1
      6. 2377715Domain d5wtac2: 5wta C:419-586 [336902]
        automated match to d1r17a2
      7. 2377716Domain d5wtad1: 5wta D:273-418 [336909]
        automated match to d1r17a1
      8. 2377717Domain d5wtad2: 5wta D:419-586 [336910]
        automated match to d1r17a2
  10. 2377718Staphylococcus aureus [TaxId:282459] [331651] (1 PDB entry)

More info for Protein automated matches from b.2.3.0: automated matches

Timeline for Protein automated matches from b.2.3.0: automated matches: