Lineage for d3fqkb1 (3fqk B:2-562)

  1. Root: SCOPe 2.07
  2. 2618030Class e: Multi-domain proteins (alpha and beta) [56572] (71 folds)
  3. 2622069Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2622070Superfamily e.8.1: DNA/RNA polymerases [56672] (8 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2623022Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 2623336Protein automated matches [190260] (25 species)
    not a true protein
  7. 2623373Species Hepatitis C virus genotype 1b (isolate bk) [TaxId:11105] [188687] (17 PDB entries)
  8. 2623388Domain d3fqkb1: 3fqk B:2-562 [175980]
    Other proteins in same PDB: d3fqka2, d3fqkb2
    automated match to d1nb4a_
    complexed with 79z

Details for d3fqkb1

PDB Entry: 3fqk (more details), 2.2 Å

PDB Description: Hepatitis C virus polymerase NS5B (BK 1-570) with HCV-796 inhibitor
PDB Compounds: (B:) RNA-directed RNA polymerase

SCOPe Domain Sequences for d3fqkb1:

Sequence, based on SEQRES records: (download)

>d3fqkb1 e.8.1.4 (B:2-562) automated matches {Hepatitis C virus genotype 1b (isolate bk) [TaxId: 11105]}
msytwtgalitpcaaeesklpinalsnsllrhhnmvyattsrsaglrqkkvtfdrlqvld
dhyrdvlkemkakastvkakllsveeackltpphsakskfgygakdvrnlsskavnhihs
vwkdlledtvtpidttimaknevfcvqpekggrkparlivfpdlgvrvcekmalydvvst
lpqvvmgssygfqyspgqrveflvntwkskknpmgfsydtrcfdstvtendirveesiyq
ccdlapearqaikslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkasa
acraaklqdctmlvngddlvvicesagtqedaaslrvfteamtrysappgdppqpeydle
litscssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlwa
rmilmthffsillaqeqlekaldcqiygacysiepldlpqiierlhglsafslhsyspge
inrvasclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavktklkltpipa
asrldlsgwfvagysggdiyh

Sequence, based on observed residues (ATOM records): (download)

>d3fqkb1 e.8.1.4 (B:2-562) automated matches {Hepatitis C virus genotype 1b (isolate bk) [TaxId: 11105]}
msytwtgalitpcaaeesklpinalsnsllrhhnmvyattsrsaglrqkkvtfdrlqvld
dhyrdvlkemkakastvkakllsveeackltpphsakskfgygakdvrnlsskavnhihs
vwkdlledtvtpidttimaknevfcvqrkparlivfpdlgvrvcekmalydvvstlpqvv
mgssygfqyspgqrveflvntwkskknpmgfsydtrcfdstvtendirveesiyqccdla
pearqaikslterlyiggpltnskgqncgyrrcrasgvlttscgntltcylkasaacraa
klqdctmlvngddlvvicesagtqedaaslrvfteamtrysappgdppqpeydlelitsc
ssnvsvahdasgkrvyyltrdpttplaraawetarhtpvnswlgniimyaptlwarmilm
thffsillaqeqlekaldcqiygacysiepldlpqiierlhglsafslhsyspgeinrva
sclrklgvpplrvwrhrarsvrarllsqggraatcgkylfnwavktklkltpipaasrld
lsgwfvagysggdiyh

SCOPe Domain Coordinates for d3fqkb1:

Click to download the PDB-style file with coordinates for d3fqkb1.
(The format of our PDB-style files is described here.)

Timeline for d3fqkb1:

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Domains from same chain:
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d3fqkb2