SCOPe 2.08: Domain d2gyda_: 2gyd A:

Lineage for d2gyda_ (2gyd A:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.25: Ferritin-like [47239] (6 superfamilies)
   core: 4 helices; bundle, closed, left-handed twist; 1 crossover connection

4. Superfamily a.25.1: Ferritin-like [47240] (10 families)
   contains bimetal-ion centre in the middle of the bundle

5. Family a.25.1.1: Ferritin [47241] (10 proteins)

6. Protein (Apo)ferritin [47246] (8 species)

7. Species Horse (Equus caballus), L chain [TaxId:9796] [47248] (83 PDB entries)

8. Domain d2gyda_: 2gyd A: [135856]
   automated match to d1gwga_
   complexed with cd, dfe

Details for d2gyda_

PDB Entry: 2gyd, 1.72 Å

PDB Description: Complex of equine apoferritin with the H-diaziflurane photolabeling reagent

PDB Compounds: (A:) ferritin L subunit

SCOPe Domain Sequences for d2gyda_:

Sequence, based on SEQRES records:

>d2gyda_ a.25.1.1 (A:) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
sqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekreg
aerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaqa
dphlcdfleshfldeevklikkmgdhltniqrlvgsqaglgeylferltl

Sequence, based on observed residues (ATOM records):

>d2gyda_ a.25.1.1 (A:) (Apo)ferritin {Horse (Equus caballus), L chain [TaxId: 9796]}
sqirqnysteveaavnrlvnlylrasytylslgfyfdrddvalegvchffrelaeekreg
aerllkmqnqrggralfqdlqkpsqdewgttldamkaaivlekslnqalldlhalgsaqa
dphlcdfleshfldeevklikkmgdhltniqrlvqaglgeylferltl

Timeline for d2gyda_:

• d2gyda_ first appeared in SCOP 1.73, called d2gyda1
  
• d2gyda_ appears in SCOPe 2.07