Lineage for d3tmqd_ (3tmq D:)

  1. Root: SCOPe 2.05
  2. 1815291Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1815292Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1821671Superfamily c.1.10: Aldolase [51569] (9 families) (S)
    Common fold covers whole protein structure
  5. 1822562Family c.1.10.4: Class I DAHP synthetase [51599] (3 proteins)
  6. 1822759Protein automated matches [190083] (7 species)
    not a true protein
  7. 1822763Species Burkholderia pseudomallei [TaxId:320372] [189833] (3 PDB entries)
  8. 1822775Domain d3tmqd_: 3tmq D: [193635]
    automated match to d3undb_
    complexed with a5p, edo, no3

Details for d3tmqd_

PDB Entry: 3tmq (more details), 2.1 Å

PDB Description: Crystal structure of a 2-dehydro-3-deoxyphosphooctonate aldolase from Burkholderia pseudomallei in complex with D-arabinose-5-phosphate
PDB Compounds: (D:) 2-dehydro-3-deoxyphosphooctonate aldolase 2

SCOPe Domain Sequences for d3tmqd_:

Sequence, based on SEQRES records: (download)

>d3tmqd_ c.1.10.4 (D:) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
mnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasfdkan
rssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpaflarqt
dlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlvvdml
gfrqmaettggcpvifdvthslqcrdplgdasggrrrqvldlaragiavgiaglfleahp
dpdrarcdgpsalplhqlegllsqmkaiddlvkrmpaleir

Sequence, based on observed residues (ATOM records): (download)

>d3tmqd_ c.1.10.4 (D:) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
mnvaispgvtagnslpfvlfgginvlesldftldvcgeyvavtrklgipfvfkasfdkan
rssihsyrgvgldeglkifaevkarfgvpvitdvheaeqaapvaeiadvlqvpaflarqt
dlvvaiakagkpvnvkkpqfmsptqlkhvvskcgevgndrvmlcergssfgydnlvvdml
gfrqmaettggcpvifdvthslqcrrqvldlaragiavgiaglfleahpdpdrsalplhq
legllsqmkaiddlvkrmpaleir

SCOPe Domain Coordinates for d3tmqd_:

Click to download the PDB-style file with coordinates for d3tmqd_.
(The format of our PDB-style files is described here.)

Timeline for d3tmqd_: