Lineage for d1sh0b_ (1sh0 B:)

  1. Root: SCOPe 2.06
  2. 2243857Class e: Multi-domain proteins (alpha and beta) [56572] (69 folds)
  3. 2246832Fold e.8: DNA/RNA polymerases [56671] (1 superfamily)
    divided into morphological domains including "palm", "thumb" and "fingers"; the catalytic "palm" domain is conserved to all members
  4. 2246833Superfamily e.8.1: DNA/RNA polymerases [56672] (7 families) (S)
    "palm" domain has a ferredoxin-like fold, related to that of an adenylyl cyclase domain
  5. 2247714Family e.8.1.4: RNA-dependent RNA-polymerase [56694] (3 proteins)
  6. 2247722Protein Viral RNA polymerase [56695] (18 species)
  7. 2247981Species Norwalk virus [TaxId:11983] [103400] (8 PDB entries)
  8. 2247987Domain d1sh0b_: 1sh0 B: [98877]

Details for d1sh0b_

PDB Entry: 1sh0 (more details), 2.17 Å

PDB Description: Crystal Structure of Norwalk Virus Polymerase (Triclinic)
PDB Compounds: (B:) RNA polymerase

SCOPe Domain Sequences for d1sh0b_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1sh0b_ e.8.1.4 (B:) Viral RNA polymerase {Norwalk virus [TaxId: 11983]}
kgtycgapilgpgsapklstktkfwrsstaplppgtyepaylggkdprvkggpslqqvmr
dqlkpfteprgkppkpsvleaakktiinvleqtidppdkwsfaqacasldkttssghphh
mrkndcwngesftgkladqaskanlmfeegknmtpvytgalkdelvktdkiygkikkrll
wgsdlatmircarafgglmdelkthcvtlpirvgmnmnedgpiiferhsryryhydadys
rwdstqqravlaaaleimvkfssephlaqvvaedllspsvvdvgdftisineglpsgvpc
tsqwnsiahwlltlcalsevtnlspdiiqanslfsfygddeivstdikldpekltaklke
yglkptrpdktegplvisedlngltflrrtvtrdpagwfgkleqssilrqmywtrgpnhe
dpsetmiphsqrpiqlmsllgeaalhgpafyskisklviaelkeggmdfyvprqepmfrw
mrfsdlstwegdrnlapsfvned

SCOPe Domain Coordinates for d1sh0b_:

Click to download the PDB-style file with coordinates for d1sh0b_.
(The format of our PDB-style files is described here.)

Timeline for d1sh0b_:

View in 3D
Domains from other chains:
(mouse over for more information)
d1sh0a_