Lineage for d1ofla_ (1ofl A:)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2813492Fold b.80: Single-stranded right-handed beta-helix [51125] (8 superfamilies)
    superhelix turns are made of parallel beta-strands and (short) turns
  4. 2813493Superfamily b.80.1: Pectin lyase-like [51126] (12 families) (S)
    superhelix turns are made of 3 strands each
  5. 2813589Family b.80.1.4: Chondroitinase B [51144] (2 proteins)
    this is a repeat family; one repeat unit is 1dbg A:263-289 found in domain
  6. 2813590Protein Chondroitinase B [51145] (1 species)
  7. 2813591Species Pedobacter heparinus [TaxId:984] [51146] (4 PDB entries)
    Uniprot Q46079 27-506
    synonym: Flavobacterium heparinum
  8. 2813593Domain d1ofla_: 1ofl A: [103934]
    complexed with ca

Details for d1ofla_

PDB Entry: 1ofl (more details), 1.7 Å

PDB Description: crystal structure of chondroitinase b complexed to dermatan sulfate hexasaccharide
PDB Compounds: (A:) chondroitinase b

SCOPe Domain Sequences for d1ofla_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ofla_ b.80.1.4 (A:) Chondroitinase B {Pedobacter heparinus [TaxId: 984]}
evvasnetlyqvvkevkpgglvqiadgtykdvqlivsnsgksglpitikalnpgkvfftg
dakvelrgehlilegiwfkdgnraiqawkshgpglvaiygsynritacvfdcfdeansay
ittsltedgkvpqhcridhcsftdkitfdqvinlnntaraikdgsvggpamyhrvdhcff
snpqkpgnagggirigyyrndigrclvdsnlfmrqdseaeiitsksqenvyygntylncq
gtmnfrhgdhqvainnfyigndqrfgyggmfvwgsrhviacnyfelsetiksrgnaalyl
npgamasehalafdmliannafinvngyaihfnplderrkeycaanrlkfetphqlmlkg
nlffkdkpyvypffkddyfiagknswtgnvalgvekgipvnisanrsaykpvkikdiqpi
egialdlnaliskgitgkplswdevrpywlkempgtyaltarlsadraakfkavikrnke
h

SCOPe Domain Coordinates for d1ofla_:

Click to download the PDB-style file with coordinates for d1ofla_.
(The format of our PDB-style files is described here.)

Timeline for d1ofla_: