PDB entry 5y27
View 5y27 on RCSB PDB site
Description: Crystal structure of Se-Met Dpb4-Dpb3
Class: DNA binding protein
Keywords: heterodimer, histone fold complex, DNA binging, epigenetic, DNA BINDING PROTEIN
Deposited on
2017-07-24, released
2018-01-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2018-01-24, with a file datestamp of
2018-01-19.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase epsilon subunit D
Species: Schizosaccharomyces pombe (strain 972 / ATCC 24843) [TaxId:284812]
Gene: dpb4, SPBC3D6.09
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5y27a_ - Chain 'B':
Compound: Putative transcription factor C16C4.22
Species: Schizosaccharomyces pombe [TaxId:284812]
Gene: SPCC16C4.22
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d5y27b1, d5y27b2 - Heterogens: GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>5y27A (A:)
mgnqdksketselddlalprsiimrlvkgvlpekslvqkealkaminsatlfvsfltsas
geiatnnnrkilmpqdvlnaldeieypefsktlkkhleayelalkekrlklpnvsdvdnr
kkakidahdttpldeekdeleeeriaediaqneveqniddvedleevndtldanaespqi
etihltdatgnpiedssesdseeslqlndssaaaenlyfqgledykddddkhhhhhhhhh
h
Sequence, based on observed residues (ATOM records): (download)
>5y27A (A:)
tselddlalprsiimrlvkgvlpekslvqkealkaminsatlfvsfltsasgeiatnnnr
kilmpqdvlnaldeieypefsktlkkhleayelalkek
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>5y27B (B:)
gplgsmektygktvlplsrvkriikqdedvhycsnasallisvatelfveklateayqla
klqkrkgiryrdvedvvrkddqfeflsdlfsi