PDB entry 5vde

View 5vde on RCSB PDB site
Description: Crystal Structure of Cu(I)-loaded yeast Atx1: Crystal Form I
Class: metal binding protein
Keywords: Atx1, metallochaperone, copper transfer, metal-binding domain, ferredoxin-like fold, METAL BINDING PROTEIN
Deposited on 2017-04-02, released 2018-02-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-02-26, with a file datestamp of 2020-02-21.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Metal homeostasis factor ATX1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ATX1, YNL259C, N0840
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vdea_
  • Chain 'B':
    Compound: Metal homeostasis factor ATX1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ATX1, YNL259C, N0840
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vdeb_
  • Chain 'C':
    Compound: Metal homeostasis factor ATX1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ATX1, YNL259C, N0840
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vdec_
  • Chain 'D':
    Compound: Metal homeostasis factor ATX1
    Species: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) [TaxId:559292]
    Gene: ATX1, YNL259C, N0840
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5vded_
  • Heterogens: CU1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5vdeA (A:)
maeikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfileki
kktgkevrsgkql

    Sequence, based on observed residues (ATOM records): (download) 
    >5vdeA (A:)
eikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfilekikk
tgkevrsgkql

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5vdeB (B:)
maeikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfileki
kktgkevrsgkql

    Sequence, based on observed residues (ATOM records): (download) 
    >5vdeB (B:)
aeikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfilekik
ktgkevrsgkql

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5vdeC (C:)
maeikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfileki
kktgkevrsgkql

    Sequence, based on observed residues (ATOM records): (download) 
    >5vdeC (C:)
eikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfilekikk
tgkevrsgkql

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5vdeD (D:)
maeikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfileki
kktgkevrsgkql

    Sequence, based on observed residues (ATOM records): (download) 
    >5vdeD (D:)
ikhyqfnvvmtcsgcsgavnkvltklepdvskidislekqlvdvyttlpydfilekikkt
gkevrsgkql