PDB entry 5tro

View 5tro on RCSB PDB site
Description: 1.8 Angstrom Resolution Crystal Structure of Dimerization and Transpeptidase domains (residues 39-608) of Penicillin-Binding Protein 1 from Staphylococcus aureus.
Class: hydrolase
Keywords: Structural Genomics, Center for Structural Genomics of Infectious Diseases, CSGID, Dimerization Domain, Transpeptidase Domain, Penicillin-Binding Protein 1, HYDROLASE
Deposited on 2016-10-26, released 2016-11-09
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-11-09, with a file datestamp of 2016-11-04.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Penicillin-binding protein 1
    Species: Staphylococcus aureus (strain COL) [TaxId:93062]
    Gene: pbp1, SACOL1194
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5troa1, d5troa2
  • Chain 'B':
    Compound: Penicillin-binding protein 1
    Species: Staphylococcus aureus (strain COL) [TaxId:93062]
    Gene: pbp1, SACOL1194
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d5trob1, d5trob2
  • Heterogens: CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5troA (A:)
snatghsngqdlvmkanekylvknaqqpergkiydrngkvlaedveryklvavidkkasa
nskkprhvvdkketakklstvinmkpeeiekrlsqkkafqiefgrkgtnltyqdklkiek
mnlpgisllpeterfypngnfashligraqknpdtgelkgalgvekifdsylsgskgslr
yihdiwgyiapntkkekqpkrgddvhltidsniqvfveealdgmveryqpkdlfavvmda
ktgeilaysqrptfnpetgkdfgkkwandlyqntyepgstfksyglaaaiqegafdpdkk
yksghrdimgsrisdwnrvgwgeipmslgftyssntlmmhlqdlvgadkmkswyerfgfg
kstkgmfdgeapgqigwsnelqqktssfgqsttvtpvqmlqaqsaffndgnmlkpwfvns
venpvskrqfykgqkqiagkpitkdtaekvekqldlvvnskkshaanyridgyevegktg
taqvaapngggyvkgpnpyfvsfmgdapkknpkvivyagmslaqkndqeayelgvskafk
pimentlkylnvgkskddtsnaeyskvpdvegq

    Sequence, based on observed residues (ATOM records): (download) 
    >5troA (A:)
qqpergkiydrngkvlaedveryklvavidkkasanskkprhvvdkketakklstvinmk
peeiekrlsqkkafqiefgrkgtnltyqdklkiekmnlpgisllpeterfypngnfashl
igraqknpdtgelkgalgvekifdsylsgkrgddvhltidsniqvfveealdgmveryqp
kdlfavvmdaktgeilaysqrptfnpetgkdfgkkwandlyqntyepgstfksyglaaai
qegafdpdkkyksghrdimgsrisdwnrvgwgeipmslgftyssntlmmhlqdlvgadkm
kswyerfgfgkstkgmfdgeapgqigwsnelqqktssfgqsttvtpvqmlqaqsaffndg
nmlkpwfvnsvenpvskrqfykgqkqiagkpitkdtaekvekqldlvvnskkshaanyri
dgyevegktgtaqvaapngggyvkgpnpyfvsfmgdapkknpkvivyagmslaqkndqea
yelgvskafkpimentlkylnvgks

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5troB (B:)
snatghsngqdlvmkanekylvknaqqpergkiydrngkvlaedveryklvavidkkasa
nskkprhvvdkketakklstvinmkpeeiekrlsqkkafqiefgrkgtnltyqdklkiek
mnlpgisllpeterfypngnfashligraqknpdtgelkgalgvekifdsylsgskgslr
yihdiwgyiapntkkekqpkrgddvhltidsniqvfveealdgmveryqpkdlfavvmda
ktgeilaysqrptfnpetgkdfgkkwandlyqntyepgstfksyglaaaiqegafdpdkk
yksghrdimgsrisdwnrvgwgeipmslgftyssntlmmhlqdlvgadkmkswyerfgfg
kstkgmfdgeapgqigwsnelqqktssfgqsttvtpvqmlqaqsaffndgnmlkpwfvns
venpvskrqfykgqkqiagkpitkdtaekvekqldlvvnskkshaanyridgyevegktg
taqvaapngggyvkgpnpyfvsfmgdapkknpkvivyagmslaqkndqeayelgvskafk
pimentlkylnvgkskddtsnaeyskvpdvegq

    Sequence, based on observed residues (ATOM records): (download) 
    >5troB (B:)
qqpergkiydrngkvlaedveryklvavidkkasanskkprhvvdkketakklstvinmk
peeiekrlsqkkafqiefgrkgtnltyqdklkiekmnlpgisllpeterfypngnfashl
igraqknpdtgelkgalgvekifdsylsgskkrgddvhltidsniqvfveealdgmvery
qpkdlfavvmdaktgeilaysqrptfnpetgkdfgkkwandlyqntyepgstfksyglaa
aiqegafdpdkkyksghrdimgsrisdwnrvgwgeipmslgftyssntlmmhlqdlvgad
kmkswyerfgfgkstkgmfdgeapgqigwsnelqqktssfgqsttvtpvqmlqaqsaffn
dgnmlkpwfvnsvenpvskrqfykgqkqiagkpitkdtaekvekqldlvvnskkshaany
ridgyevegktgtaqvaapngggyvkgpnpyfvsfmgdapkknpkvivyagmslaqkndq
eayelgvskafkpimentlkylnvgk