PDB entry 5noo

View 5noo on RCSB PDB site
Description: Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex
Class: transferase
Keywords: transferase, enzyme, nematode, complex
Deposited on 2017-04-12, released 2017-05-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-09-06, with a file datestamp of 2017-09-01.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Thymidylate synthase
    Species: Caenorhabditis elegans [TaxId:6239]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nooa_
  • Chain 'B':
    Compound: Thymidylate synthase
    Species: Caenorhabditis elegans [TaxId:6239]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5noob_
  • Chain 'C':
    Compound: Thymidylate synthase
    Species: Caenorhabditis elegans [TaxId:6239]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nooc_
  • Chain 'D':
    Compound: Thymidylate synthase
    Species: Caenorhabditis elegans [TaxId:6239]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d5nood_
  • Heterogens: UMP, D16, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5nooA (A:)
mevmnkeniiadapsdvvktvqqqvhlnqdeykylkqveqilregtrrddrtgtgtisif
gmqskyclrngtipllttkrvywkgvleellwfisgstdgkllmeknvkiwekngdrafl
dnlgftsreegdlgpvygfqwrhfgakyvdchtdysgqgvdqlaevirqikeqpdsrrii
msawnpsdlgqmvlppchtmcqfyvdngelscqlyqrsgdmglgvpfnlasygllthmia
kvcglkpgtlvhtlgdahvysnhvdalkiqldrepyafpkirftrdvasiddftsdmial
ddykchpkipmdmav

    Sequence, based on observed residues (ATOM records): (download) 
    >5nooA (A:)
qvhlnqdeykylkqveqilregtrrddrtgtgtisifgmqskyclrngtipllttkrvyw
kgvleellwfisgstdgkllmeknvkiwekngdrafldnlgftsreegdlgpvygfqwrh
fgakyvdchtdysgqgvdqlaevirqikeqpdsrriimsawnpsdlgqmvlppchtmcqf
yvdngelscqlyqrsgdmglgvpfnlasygllthmiakvcglkpgtlvhtlgdahvysnh
vdalkiqldrepyafpkirftrdvasiddftsdmialddykchpkip

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5nooB (B:)
mevmnkeniiadapsdvvktvqqqvhlnqdeykylkqveqilregtrrddrtgtgtisif
gmqskyclrngtipllttkrvywkgvleellwfisgstdgkllmeknvkiwekngdrafl
dnlgftsreegdlgpvygfqwrhfgakyvdchtdysgqgvdqlaevirqikeqpdsrrii
msawnpsdlgqmvlppchtmcqfyvdngelscqlyqrsgdmglgvpfnlasygllthmia
kvcglkpgtlvhtlgdahvysnhvdalkiqldrepyafpkirftrdvasiddftsdmial
ddykchpkipmdmav

    Sequence, based on observed residues (ATOM records): (download) 
    >5nooB (B:)
qvhlnqdeykylkqveqilregtrrddrtgtgtisifgmqskyclrngtipllttkrvyw
kgvleellwfisgstdgkllmeknvkiwekngdrafldnlgftsreegdlgpvygfqwrh
fgakyvdchtdysgqgvdqlaevirqikeqpdsrriimsawnpsdlgqmvlppchtmcqf
yvdngelscqlyqrsgdmglgvpfnlasygllthmiakvcglkpgtlvhtlgdahvysnh
vdalkiqldrepyafpkirftrdvasiddftsdmialddykchpkip

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5nooC (C:)
mevmnkeniiadapsdvvktvqqqvhlnqdeykylkqveqilregtrrddrtgtgtisif
gmqskyclrngtipllttkrvywkgvleellwfisgstdgkllmeknvkiwekngdrafl
dnlgftsreegdlgpvygfqwrhfgakyvdchtdysgqgvdqlaevirqikeqpdsrrii
msawnpsdlgqmvlppchtmcqfyvdngelscqlyqrsgdmglgvpfnlasygllthmia
kvcglkpgtlvhtlgdahvysnhvdalkiqldrepyafpkirftrdvasiddftsdmial
ddykchpkipmdmav

    Sequence, based on observed residues (ATOM records): (download) 
    >5nooC (C:)
qvhlnqdeykylkqveqilregtrrdgtgtisifgmqskyclrngtipllttkrvywkgv
leellwfisgstdgkllmeknvkiwekngdrafldnlgftsreegdlgpvygfqwrhfga
kyvdchtdysgqgvdqlaevirqikeqpdsrriimsawnpsdlgqmvlppchtmcqfyvd
ngelscqlyqrsgdmglgvpfnlasygllthmiakvcglkpgtlvhtlgdahvysnhvda
lkiqldrepyafpkirftrdvasiddftsdmialddykchpkip

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5nooD (D:)
mevmnkeniiadapsdvvktvqqqvhlnqdeykylkqveqilregtrrddrtgtgtisif
gmqskyclrngtipllttkrvywkgvleellwfisgstdgkllmeknvkiwekngdrafl
dnlgftsreegdlgpvygfqwrhfgakyvdchtdysgqgvdqlaevirqikeqpdsrrii
msawnpsdlgqmvlppchtmcqfyvdngelscqlyqrsgdmglgvpfnlasygllthmia
kvcglkpgtlvhtlgdahvysnhvdalkiqldrepyafpkirftrdvasiddftsdmial
ddykchpkipmdmav

    Sequence, based on observed residues (ATOM records): (download) 
    >5nooD (D:)
hlnqdeykylkqveqilregtrrddtgtgtisifgmqskyclrngtipllttkrvywkgv
leellwfisgstdgkllmeknvkiwekngdrafldnlgftsreegdlgpvygfqwrhfga
kyvdchtdysgqgvdqlaevirqikeqpdsrriimsawnpsdlgqmvlppchtmcqfyvd
ngelscqlyqrsgdmglgvpfnlasygllthmiakvcglkpgtlvhtlgdahvysnhvda
lkiqldrepyafpkirftrdvasiddftsdmialddykchpkipmd