PDB entry 5das

View 5das on RCSB PDB site
Description: Structure of Mycobacterium tuberculosis NadD in complex with NADP, P21212, form 2
Class: transferase
Keywords: Rossman fold, TRANSFERASE
Deposited on 2015-08-20, released 2016-08-24
The last revision prior to the SCOPe 2.06 freeze date was dated 2016-08-24, with a file datestamp of 2016-08-18.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: N/A
AEROSPACI score: 0.27 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: nicotinate-nucleotide adenylyltransferase
    Species: Mycobacterium tuberculosis [TaxId:83332]
    Gene: nadD, Rv2421c, MTCY428.26
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WJJ5 (9-200)
      • expression tag (0-3)
      • see remark 999 (4-8)
      • engineered mutation (196)
      • engineered mutation (200)
    Domains in SCOPe 2.06: d5dasa1, d5dasa2
  • Chain 'B':
    Compound: nicotinate-nucleotide adenylyltransferase
    Species: Mycobacterium tuberculosis [TaxId:83332]
    Gene: nadD, Rv2421c, MTCY428.26
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WJJ5 (9-200)
      • expression tag (0-3)
      • see remark 999 (4-8)
      • engineered mutation (196)
      • engineered mutation (200)
    Domains in SCOPe 2.06: d5dasb1, d5dasb2
  • Chain 'C':
    Compound: nicotinate-nucleotide adenylyltransferase
    Species: Mycobacterium tuberculosis [TaxId:83332]
    Gene: nadD, Rv2421c, MTCY428.26
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WJJ5 (9-200)
      • expression tag (0-3)
      • see remark 999 (4-8)
      • engineered mutation (196)
      • engineered mutation (200)
    Domains in SCOPe 2.06: d5dasc1, d5dasc2
  • Chain 'D':
    Compound: nicotinate-nucleotide adenylyltransferase
    Species: Mycobacterium tuberculosis [TaxId:83332]
    Gene: nadD, Rv2421c, MTCY428.26
    Database cross-references and differences (RAF-indexed):
    • Uniprot P9WJJ5 (9-200)
      • expression tag (0-3)
      • see remark 999 (4-8)
      • engineered mutation (196)
      • engineered mutation (200)
    Domains in SCOPe 2.06: d5dasd1, d5dasd2
  • Heterogens: NAP, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5dasA (A:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpwqkgrqvsaaehryl
mtviatasnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimswqg
weelfelarfvgvsrpgyelrnehitsllgqlakdaltlveipalaisstdcrqraeqsr
plwylmpdgvvqyvskrrlyt

    Sequence, based on observed residues (ATOM records): (download) 
    >5dasA (A:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpwrqvsaaehrylmtv
iatasnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimswqgwee
lfelarfvgvsrpgyelrnehitsllgqlakdaltlveipalaisstdcrqraeqsrplw
ylmpdgvvqyvskrrlyt

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >5dasB (B:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpwqkgrqvsaaehryl
mtviatasnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimswqg
weelfelarfvgvsrpgyelrnehitsllgqlakdaltlveipalaisstdcrqraeqsr
plwylmpdgvvqyvskrrlyt

    Sequence, based on observed residues (ATOM records): (download) 
    >5dasB (B:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpvsaaehrylmtviat
asnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimseelfelarf
vgvsrpgaltlveipalaisstdcrqraeqsrplwylmpdgvvqyvskrrlyt

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >5dasC (C:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpwqkgrqvsaaehryl
mtviatasnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimswqg
weelfelarfvgvsrpgyelrnehitsllgqlakdaltlveipalaisstdcrqraeqsr
plwylmpdgvvqyvskrrlyt

    Sequence, based on observed residues (ATOM records): (download) 
    >5dasC (C:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpwqkgrqvsaaehryl
mtviatasnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimswee
lfelarfvgvsrpgaltlveipalaisstdcrqraeqsrplwylmpdgvvqyvskrrlyt

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >5dasD (D:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpwqkgrqvsaaehryl
mtviatasnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimswqg
weelfelarfvgvsrpgyelrnehitsllgqlakdaltlveipalaisstdcrqraeqsr
plwylmpdgvvqyvskrrlyt

    Sequence, based on observed residues (ATOM records): (download) 
    >5dasD (D:)
gamgrrlgvmggtfdpihyghlvaasevadlfdldevvfvpsgqpvsaaehrylmtviat
asnprfsvsrvdidrggptytkdtladlhalhpdselyfttgadalasimseelfelarf
vgvsrpaltlveipalaisstdcrqraeqsrplwylmpdgvvqyvskrrlyt