PDB entry 3sjo

View 3sjo on RCSB PDB site
Description: structure of EV71 3C in complex with Rupintrivir (AG7088)
Class: hydrolase/hydrolase inhibitor
Keywords: in complex with Rupintrivir, Chymotrypsin-like fold, protease, C147 covalently binds to Rupintrivir, HYDROLASE-HYDROLASE INHIBITOR complex
Deposited on 2011-06-21, released 2011-08-10
The last revision prior to the SCOPe 2.01 freeze date was dated 2011-09-28, with a file datestamp of 2011-09-23.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.208
AEROSPACI score: 0.5 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3sjod_
  • Chain 'E':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.01: d3sjoe_
  • Chain 'F':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: 3C protease
    Species: Human enterovirus 71 [TaxId:39054]
    Gene: 3C
    Database cross-references and differences (RAF-indexed):
  • Heterogens: AG7, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3sjoD (D:)
mgpsldfalsllrrnirqvqtdqghftmlgvrdrlavlprhsqpgktiwiehklvnvlda
velvdeqgvnleltlitldtnekfrditkfipenistasdatlvintehmpsmfvpvgdv
vqygflnlsgkpthrtmmynfptkagqcggvvtsvgkvigihiggngrqgfcaglkrsyf
aseqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3sjoD (D:)
ldfalsllrrnirqvqtdqghftmlgvrdrlavlprhsqpgktiwiehklvnvldavelv
deqgvnleltlitldtnekfrditkfipenistasdatlvintehmpsmfvpvgdvvqyg
flnlsgkpthrtmmynfptkagqcggvvtsvgkvigihiggngrqgfcaglkrsyfase

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3sjoE (E:)
mgpsldfalsllrrnirqvqtdqghftmlgvrdrlavlprhsqpgktiwiehklvnvlda
velvdeqgvnleltlitldtnekfrditkfipenistasdatlvintehmpsmfvpvgdv
vqygflnlsgkpthrtmmynfptkagqcggvvtsvgkvigihiggngrqgfcaglkrsyf
aseqhhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3sjoE (E:)
ldfalsllrrnirqvqtdqghftmlgvrdrlavlprhsqpgktiwiehklvnvldavelv
deqgvnleltlitldtnekfrditkfipenistasdatlvintehmpsmfvpvgdvvqyg
flnlsgkpthrtmmynfptkagqcggvvtsvgkvigihiggngrqgfcaglkrsyfase

  • Chain 'F':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.