PDB entry 3kqg

View 3kqg on RCSB PDB site
Description: Trimeric Structure of Langerin
Class: immune system
Keywords: trimer, neck and CRD, Coiled coil, Lectin, IMMUNE SYSTEM
Deposited on 2009-11-17, released 2010-02-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2010-05-05, with a file datestamp of 2010-04-30.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.185
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJ71
      • engineered (131)
    Domains in SCOPe 2.05: d3kqga1, d3kqga2
  • Chain 'B':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJ71
      • engineered (131)
    Domains in SCOPe 2.05: d3kqgb1, d3kqgb2
  • Chain 'C':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJ71
      • engineered (131)
    Domains in SCOPe 2.05: d3kqgc1, d3kqgc2
  • Chain 'D':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJ71
      • engineered (131)
    Domains in SCOPe 2.05: d3kqgd1, d3kqgd2
  • Chain 'E':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJ71
      • engineered (131)
    Domains in SCOPe 2.05: d3kqge1, d3kqge2
  • Chain 'F':
    Compound: C-type lectin domain family 4 member K
    Species: Homo sapiens [TaxId:9606]
    Gene: CD207, CLEC4K
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJ71
      • engineered (131)
    Domains in SCOPe 2.05: d3kqgf1, d3kqgf2
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3kqgA (A:)
astlnaqipelksdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnf
yyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwsw
vddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvps
ep

    Sequence, based on observed residues (ATOM records): (download) 
    >3kqgA (A:)
sdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnfyyfslipktwys
aeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwswvddtpfnkvqsa
rfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvpse

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3kqgB (B:)
astlnaqipelksdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnf
yyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwsw
vddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvps
ep

    Sequence, based on observed residues (ATOM records): (download) 
    >3kqgB (B:)
lntkiralqgslenmskllkrqndilqvvsqgwkyfkgnfyyfslipktwysaeqfcvsr
nshltsvtseseqeflyktaggliywigltkaggdwswvddtpfnkvqsarfwipgepnn
agnnehcgnikapslqawndapcdktflfickrpyvp

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3kqgC (C:)
astlnaqipelksdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnf
yyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwsw
vddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvps
ep

    Sequence, based on observed residues (ATOM records): (download) 
    >3kqgC (C:)
lntkiralqgslenmskllkrqndilqvvsqgwkyfkgnfyyfslipktwysaeqfcvsr
nshltsvtseseqeflyktaggliywigltkagmegdwswvddtpfnkvqsarfwipgep
nnagnnehcgnikapslqawndapcdktflfickrpyvp

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3kqgD (D:)
astlnaqipelksdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnf
yyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwsw
vddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvps
ep

    Sequence, based on observed residues (ATOM records): (download) 
    >3kqgD (D:)
alntkiralqgslenmskllkrqndilqvvsqgwkyfkgnfyyfslipktwysaeqfcvs
rnshltsvtseseqeflyktaggliywigltkagdwswvddtpfnkvqsarfwipgepnn
agnnehcgnikapslqawndapcdktflfickrpyvps

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3kqgE (E:)
astlnaqipelksdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnf
yyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwsw
vddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvps
ep

    Sequence, based on observed residues (ATOM records): (download) 
    >3kqgE (E:)
lntkiralqgslenmskllkrqndilqvvsqgwkyfkgnfyyfslipktwysaeqfcvsr
nshltsvtseseqeflyktaggliywigltkagmegdwswvddtpfnkvqsarfwipgep
nnagnnehcgnikapslqawndapcdktflfickrpyvps

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3kqgF (F:)
astlnaqipelksdlekasalntkiralqgslenmskllkrqndilqvvsqgwkyfkgnf
yyfslipktwysaeqfcvsrnshltsvtseseqeflyktaggliywigltkagmegdwsw
vddtpfnkvqsarfwipgepnnagnnehcgnikapslqawndapcdktflfickrpyvps
ep

    Sequence, based on observed residues (ATOM records): (download) 
    >3kqgF (F:)
salntkiralqgslenmskllkrqndilqvvsqgwkyfkgnfyyfslipktwysaeqfcv
srnshltsvtseseqeflyktaggliywigltkagmegdwswvddtpfnkvqsarfwipg
epnnagnnehcgnikapslqawndapcdktflfickrpyvps