PDB entry 2gk0
View 2gk0 on RCSB PDB site
Description: Structure of Catalytic Elimination Antibody 13G5 from a twinned crystal in space group C2
Class: immune system
Keywords: immunoglobulin,catalytic antibody, elimination, IMMUNE SYSTEM
Deposited on
2006-03-31, released
2007-02-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.236
AEROSPACI score: 0.22
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Catalytic elimination antibody 13G5 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gk0a1, d2gk0a2 - Chain 'B':
Compound: Catalytic elimination antibody 13G5 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gk0b_ - Chain 'H':
Compound: Catalytic elimination antibody 13G5 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gk0h_ - Chain 'L':
Compound: Catalytic elimination antibody 13G5 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2gk0l1, d2gk0l2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2gk0A (A:)
elvmtqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkinrveaedlgvyycfqgshlpptfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2gk0B (B:)
qvqlkesgpglvapsqslsitctvsgfsltnygvdwvrqppgkglewvgviwsggstnyn
salmsrlsiskdnsksqvflkmnslqtddtavyycakhwggyyipygmdhwgqgttvtvs
sakttppsvyplapgcgdttgssvtlgclvkgyfpepvtvtwnsgslsssvhtfpallqs
glytmsssvtvpsstwpsqtvtcsvahpassttvdkklepr
Sequence, based on observed residues (ATOM records): (download)
>2gk0B (B:)
qvqlkesgpglvapsqslsitctvsgfsltnygvdwvrqppgkglewvgviwsggstnyn
salmsrlsiskdnsksqvflkmnslqtddtavyycakhwgygmdhwgqgttvtvssaktt
ppsvyplapgcgdttgssvtlgclvkgyfpepvtvtwnsgslsssvhtfpallqsglytm
sssvtvpsstwpsqtvtcsvahpassttvdkklepr
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2gk0H (H:)
qvqlkesgpglvapsqslsitctvsgfsltnygvdwvrqppgkglewvgviwsggstnyn
salmsrlsiskdnsksqvflkmnslqtddtavyycakhwggyyipygmdhwgqgttvtvs
sakttppsvyplapgcgdttgssvtlgclvkgyfpepvtvtwnsgslsssvhtfpallqs
glytmsssvtvpsstwpsqtvtcsvahpassttvdkklepr
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2gk0L (L:)
elvmtqtplslpvslgdqasiscrssqsivhsngntylewylqkpgqspklliykvsnrf
sgvpdrfsgsgsgtdftlkinrveaedlgvyycfqgshlpptfgggtkleikradaaptv
sifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysm
sstltltkdeyerhnsytceathktstspivksfnrn