Lineage for d1ud8a2 (1ud8 A:1-390)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2826025Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2829818Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 2829819Family c.1.8.1: Amylase, catalytic domain [51446] (26 proteins)
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. 2829944Protein Bacterial alpha-amylase [51447] (10 species)
  7. 2829962Species Bacillus sp., ksm-k38 [TaxId:1409] [89463] (6 PDB entries)
  8. 2829968Domain d1ud8a2: 1ud8 A:1-390 [88480]
    Other proteins in same PDB: d1ud8a1
    complexed with na

Details for d1ud8a2

PDB Entry: 1ud8 (more details), 2.88 Å

PDB Description: Crystal structure of AmyK38 with lithium ion
PDB Compounds: (A:) amylase

SCOPe Domain Sequences for d1ud8a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1ud8a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}

SCOPe Domain Coordinates for d1ud8a2:

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Timeline for d1ud8a2:

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